Package | Description |
---|---|
de.jstacs.sequenceScores.statisticalModels.trainable.hmm.states.emissions.discrete |
Modifier and Type | Class and Description |
---|---|
class |
DiscreteEmission
This class implements a simple discrete emission without any condition.
|
class |
PhyloDiscreteEmission
Phylogenetic discrete emission
This class uses a phylogenetic tree to describe multidimensional data
It implements Felsensteins model for nucleotide substitution (F81)
|
class |
ReferenceSequenceDiscreteEmission
This class implements a discrete emission that depends on some
ReferenceSequenceAnnotation
at a certain reference position. |
Modifier and Type | Method and Description |
---|---|
AbstractConditionalDiscreteEmission |
AbstractConditionalDiscreteEmission.clone() |