Uses of Interface
de.jstacs.InstantiableFromParameterSet

Packages that use InstantiableFromParameterSet

de.jstacs.data	Provides classes for the representation of data.
de.jstacs.data.alphabets	Provides classes for the representation of discrete and continuous alphabets, including a DNAAlphabet for the most common case of DNA-sequences
de.jstacs.io	Provides classes for reading data from and writing to a file and storing a number of datatypes, including all primitives, arrays of primitives, and Storables to an XML-representation
de.jstacs.models.discrete
de.jstacs.models.discrete.inhomogeneous	This package contains various inhomogeneous models.
de.jstacs.models.mixture.gibbssampling	This package contains many classes that can be used while a Gibbs sampling.
de.jstacs.parameters	This package provides classes for parameters that establish a general convention for the description of parameters as defined in the Parameter-interface.

Uses of InstantiableFromParameterSet in de.jstacs.data

Classes in de.jstacs.data that implement InstantiableFromParameterSet

class	Alphabet Class for an Alphabet.
class	AlphabetContainer The container for some alphabets used in a sequence, sample, model or ... .

Uses of InstantiableFromParameterSet in de.jstacs.data.alphabets

Classes in de.jstacs.data.alphabets that implement InstantiableFromParameterSet

class	ComplementableDiscreteAlphabet This abstract class indicates that an alphabet can be used for to compute the complement.
class	ContinuousAlphabet Class for a continuous alphabet.
class	DiscreteAlphabet Class for an alphabet that consists of arbitrary Strings.
class	DNAAlphabet This class implements the alphabet that is used for DNA.

Uses of InstantiableFromParameterSet in de.jstacs.io

Methods in de.jstacs.io that return InstantiableFromParameterSet

static InstantiableFromParameterSet	ParameterSetParser.getInstanceFromParameterSet(ParameterSet pars) Returns an instance of a subclass of InstantiableFromParameterSet that can be instantiated by the ParameterSet pars.
static InstantiableFromParameterSet	ParameterSetParser.getInstanceFromParameterSet(ParameterSet pars, Class instanceClass) Returns an instance of a subclass of InstantiableFromParameterSet that can be instantiated by the ParameterSet pars.

Uses of InstantiableFromParameterSet in de.jstacs.models.discrete

Classes in de.jstacs.models.discrete that implement InstantiableFromParameterSet

class

DiscreteGraphicalModel This is the main class for all discrete graphical models (DGM)

Uses of InstantiableFromParameterSet in de.jstacs.models.discrete.inhomogeneous

Classes in de.jstacs.models.discrete.inhomogeneous that implement InstantiableFromParameterSet

class	BayesianNetworkModel The class implements a Bayesian network of fixed order.
class	DAGModel The abstract class for directed acyclic graphical models.
class	FSDAGModel This class can be used for any discrete fixed structure DAG model (FSDAGModel).
class	InhomogeneousDGM This class is the main class for all inhomgeneous discrete graphical models (IDGM).

Uses of InstantiableFromParameterSet in de.jstacs.models.mixture.gibbssampling

Classes in de.jstacs.models.mixture.gibbssampling that implement InstantiableFromParameterSet

class

FSDAGModelForGibbsSampling This is the class for a fixed structure directed acyclic graphical model that can be used in a Gibbs sampling.

Uses of InstantiableFromParameterSet in de.jstacs.parameters

Methods in de.jstacs.parameters that return InstantiableFromParameterSet

InstantiableFromParameterSet

ParameterSet.getInstance() Returns a new instance of the class of getInstanceClass() that was created using this ParameterSet.