Uses of Class
de.jstacs.data.sequences.WrongSequenceTypeException

Packages that use WrongSequenceTypeException

de.jstacs.data.sequences	Provides classes for representing sequences.
de.jstacs.models.discrete.homogeneous
de.jstacs.models.utils

Uses of WrongSequenceTypeException in de.jstacs.data.sequences

Constructors in de.jstacs.data.sequences that throw WrongSequenceTypeException

ArbitrarySequence(AlphabetContainer alphabetContainer, double[] content)
This constructor is designed for the method AbstractModel.emitSample(int, int...).

ArbitrarySequence(AlphabetContainer alphabetContainer, SequenceAnnotation[] annotation, String sequence, String delim)
Creates a new sequence from a string representation using the delimiter delim.

ArbitrarySequence(AlphabetContainer alphabetContainer, SequenceAnnotation[] annotation, SymbolExtractor extractor)
Creates a new sequence from a SymbolExtractor.

ArbitrarySequence(AlphabetContainer alphabetContainer, String sequence)
Creates a new sequence from a string representation using the default delimiter.

ByteSequence(AlphabetContainer alphabetContainer, byte[] content)
This constructor is designed for the method AbstractModel.emitSample(int, int...).

ByteSequence(AlphabetContainer alphabetContainer, SequenceAnnotation[] annotation, String sequence, String delim)
Creates a new sequence from a string representation using the delimiter delim.

ByteSequence(AlphabetContainer alphabetContainer, SequenceAnnotation[] annotation, SymbolExtractor extractor)
Creates a new sequence from a SymbolExtractor.

ByteSequence(AlphabetContainer alphabetContainer, String sequence)
Creates a new sequence from a string representation using the default delimiter.

IntSequence(AlphabetContainer alphabetContainer, int[] content)
This constructor is designed for Model.emitSample(int, int...).

IntSequence(AlphabetContainer alphabetContainer, int[] content, int start, int length)
This constructor creates an instance from a part of the content.

IntSequence(AlphabetContainer alphabetContainer, SequenceAnnotation[] annotation, String sequence, String delim)
Creates a new sequence from a string representation using the delimiter delim.

IntSequence(AlphabetContainer alphabetContainer, SequenceAnnotation[] annotation, SymbolExtractor extractor)
Creates a new sequence from a SymbolExtractor.

IntSequence(AlphabetContainer alphabetContainer, String sequence)
Creates a new sequence from a string representation using the default delimiter.

ShortSequence(AlphabetContainer alphabetContainer, SequenceAnnotation[] annotation, String sequence, String delim)
Creates a new sequence from a string representation using the delimiter delim.

ShortSequence(AlphabetContainer alphabetContainer, SequenceAnnotation[] annotation, SymbolExtractor extractor)
Creates a new sequence from a SymbolExtractor.

ShortSequence(AlphabetContainer alphabetContainer, short[] content)
This constructor is designed for the method AbstractModel.emitSample(int, int...).

ShortSequence(AlphabetContainer alphabetContainer, String sequence)
Creates a new sequence from a string representation using the default delimiter.

SparseSequence(AlphabetContainer alphCon, String seq)
This constructor creates an instance from a String.

SparseSequence(AlphabetContainer alphCon, SymbolExtractor se)
This constructor creates an instance from a SymbolExtractor.

Uses of WrongSequenceTypeException in de.jstacs.models.discrete.homogeneous

Methods in de.jstacs.models.discrete.homogeneous that throw WrongSequenceTypeException

Sample	HomogeneousModel.emitSample(int no, int... length) Creates a sample of nosequences.
protected abstract Sequence	HomogeneousModel.getRandomSequence(Random r, int length) This method creates a sequence from a trained model.
protected Sequence	HomogeneousMM.getRandomSequence(Random r, int length)

Uses of WrongSequenceTypeException in de.jstacs.models.utils

Methods in de.jstacs.models.utils that throw WrongSequenceTypeException

Sequence

ModelTester.SeqIterator.getSequence()