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0 for arbitrary length
StartDistanceForecaster that returns the
median of a limited memory over the last values.slots memory slots
that will initially be filled with value.
Parameters from the leaves of this tree in left-to-right order (as specified by the order of the alphabet) and returns them as a LinkedList.
ResultSets that are part of this ListResult
Result that contains a list or a matrix, respectively, of ResultSets.ListResult from an array of ResultSets and a ResultSet
of annotations, which may provide additional information on this ListResult
ListResult from the corresponding XML-representation.
ParameterSet.
SequenceAnnotation that has a position on the sequence,
e.g for transcription start sites or intron-exon junctions.LocatedSequenceAnnotation of type type
, with identifier identifier, and additional annotation
(that does not fit the SequenceAnnotation definitions)
result.
LocatedSequenceAnnotation of type type
, with identifier identifier, and additional annotation
(that does not fit the SequenceAnnotation definitions)
result.
LocatedSequenceAnnotation of type type
, with identifier identifier, additional annotation (that
does not fit the SequenceAnnotation definitions)
result, and sub annotations.
LocatedSequenceAnnotation of type type
, with identifier identifier, additional annotation (that
does not fit the SequenceAnnotation definitions)
result, and sub annotations.
LocatedSequenceAnnotation from its XML
representation as returned by LocatedSequenceAnnotation.toXML().
SequenceAnnotation that has a position on the sequence
and a length, e.g. for donor splice sites, exons, or genes.LocatedSequenceAnnotationWithLength of type
type, with identifier identifier, and
additional annotation (that does not fit the SequenceAnnotation
definitions) result.
LocatedSequenceAnnotationWithLength of type
type, with identifier identifier, and
additional annotation (that does not fit the SequenceAnnotation
definitions).
LocatedSequenceAnnotationWithLength of type
type, with identifier identifier, additional
annotation (that does not fit the SequenceAnnotation definitions)
result, and sub-annotations.
LocatedSequenceAnnotationWithLength of type
type, with identifier identifier, additional
annotation (that does not fit the SequenceAnnotation definitions)
result, and sub-annotations.
LocatedSequenceAnnotationWithLength from its XML
representation as returned by
LocatedSequenceAnnotationWithLength.toXML().
double contains sum of the logarithm of the gamma functions used in the prior.
double contains logarithm of the normalization constant of hidden parameters of the instance.
d with the values
of d given as d[i] = Math.log( val[i] ).
d between start
index startD and end index endD with the values
of d given as d[i] = Math.log( val[i] ).
d within start
index startD and end index endD with the values
of d given as d[i] = Math.log( val[i] ).
d between start
index startD and end index endD with the values
of d given as d[i] = Math.log( val[i] ).
d within start
index startD and end index endD with the values
of d given logarithmised:
d[i] = Math.log( val[i] ).
d with the values
of d given as d[i] = Math.log( val[i] ) using
offset offset.
d between start
index startD and end index endD with the values
of d given as d[i] = Math.log( val[i] ) using
offset offset.
d between start
index startD and end index endD with the values
of d given as d[i] = Math.log( val[i] ) using
offset offset.
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