Uses of Class
de.jstacs.results.ImageResult

Packages that use ImageResult
de.jstacs.classifier This package provides the framework for any classifier. 
de.jstacs.classifier.utils Provides some useful classes for working with classifiers 
de.jstacs.motifDiscovery This package provides the framework including the interface for any de novo motif discoverer 
 

Uses of ImageResult in de.jstacs.classifier
 

Methods in de.jstacs.classifier that return ImageResult
static ImageResult AbstractScoreBasedClassifier.DoubleTableResult.plot(REnvironment e, AbstractScoreBasedClassifier.DoubleTableResult... dtr)
          This method plots an array of AbstractScoreBasedClassifier.DoubleTableResults in one image.
 

Uses of ImageResult in de.jstacs.classifier.utils
 

Methods in de.jstacs.classifier.utils that return ImageResult
static ImageResult ClassificationVisualizer.getScatterplot(AbstractScoreBasedClassifier cl1, AbstractScoreBasedClassifier cl2, Sample class0, Sample class1, REnvironment e, boolean drawThreshold)
          This method returns an ImageResult containing a scatter plot of the scores for the given classifiers cl1 and cl2.
static ImageResult ClassificationVisualizer.plotScores(AbstractScoreBasedClassifier cl, Sample class0, Sample class1, REnvironment e, int bins, double density, String plotOptions)
          This method returns an ImageResult containing a plot of the histograms of the scores.
 

Uses of ImageResult in de.jstacs.motifDiscovery
 

Methods in de.jstacs.motifDiscovery that return ImageResult
static ImageResult MotifDiscovererToolBox.plot(MotifDiscoverer motifDisc, int component, int motif, Sequence sequence, int startpos, REnvironment r, int width, int height, MotifDiscoverer.KindOfProfile kind)
          This method creates a simple plot of the profile of scores for a sequence and a start position.
static ImageResult MotifDiscovererToolBox.plotAndAnnotate(MotifDiscoverer motifDisc, int component, int motif, Sequence sequence, int startpos, REnvironment r, int width, int height, double yMin, double yMax, double threshold, MotifDiscoverer.KindOfProfile kind)
          This method creates a plot of the profile of scores for a sequence and a start position and annotates bindings sites in the plot that have a higher score than threshold.