de.jstacs.motifDiscovery
Enum MutableMotifDiscovererToolbox.InitMethodForScoringFunction

java.lang.Object
  extended by java.lang.Enum<MutableMotifDiscovererToolbox.InitMethodForScoringFunction>
      extended by de.jstacs.motifDiscovery.MutableMotifDiscovererToolbox.InitMethodForScoringFunction
All Implemented Interfaces:
Serializable, Comparable<MutableMotifDiscovererToolbox.InitMethodForScoringFunction>
Enclosing class:
MutableMotifDiscovererToolbox

public static enum MutableMotifDiscovererToolbox.InitMethodForScoringFunction
extends Enum<MutableMotifDiscovererToolbox.InitMethodForScoringFunction>

This enum defines some constants for the method MutableMotifDiscovererToolbox.getSortedInitialParameters(Sample[], ScoringFunction[], InitMethodForScoringFunction[], OptimizableFunction, int, SafeOutputStream). These constants define how to initialize the ScoringFunctions.

Author:
Jens Keilwagen

Enum Constant Summary
NOTHING
          This constants indicates that the ScoringFunction should not be initialized, i.e. the instance is not changed and uses the current parameters.
PLUG_IN
          This constants indicates that the ScoringFunction should be initialized using ScoringFunction.initializeFunction(int, boolean, Sample[], double[][]).
RANDOMLY
          This constants indicates that the ScoringFunction should be initialized using ScoringFunction.initializeFunctionRandomly(boolean).
 
Method Summary
static MutableMotifDiscovererToolbox.InitMethodForScoringFunction valueOf(String name)
          Returns the enum constant of this type with the specified name.
static MutableMotifDiscovererToolbox.InitMethodForScoringFunction[] values()
          Returns an array containing the constants of this enum type, in the order they're declared.
 
Methods inherited from class java.lang.Enum
clone, compareTo, equals, getDeclaringClass, hashCode, name, ordinal, toString, valueOf
 
Methods inherited from class java.lang.Object
finalize, getClass, notify, notifyAll, wait, wait, wait
 

Enum Constant Detail

PLUG_IN

public static final MutableMotifDiscovererToolbox.InitMethodForScoringFunction PLUG_IN
This constants indicates that the ScoringFunction should be initialized using ScoringFunction.initializeFunction(int, boolean, Sample[], double[][]).


RANDOMLY

public static final MutableMotifDiscovererToolbox.InitMethodForScoringFunction RANDOMLY
This constants indicates that the ScoringFunction should be initialized using ScoringFunction.initializeFunctionRandomly(boolean).


NOTHING

public static final MutableMotifDiscovererToolbox.InitMethodForScoringFunction NOTHING
This constants indicates that the ScoringFunction should not be initialized, i.e. the instance is not changed and uses the current parameters.

Method Detail

values

public static final MutableMotifDiscovererToolbox.InitMethodForScoringFunction[] values()
Returns an array containing the constants of this enum type, in the order they're declared. This method may be used to iterate over the constants as follows:
for(MutableMotifDiscovererToolbox.InitMethodForScoringFunction c : MutableMotifDiscovererToolbox.InitMethodForScoringFunction.values())
        System.out.println(c);

Returns:
an array containing the constants of this enum type, in the order they're declared

valueOf

public static MutableMotifDiscovererToolbox.InitMethodForScoringFunction valueOf(String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:
name - the name of the enum constant to be returned.
Returns:
the enum constant with the specified name
Throws:
IllegalArgumentException - if this enum type has no constant with the specified name