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File
s.Parameter
that represents a local file.Storable
.
FileParameter
.
FileParameter
.
FileParameter.FileRepresentation
out of the filename and the
file's contents.
Storable
.
fillEmptyWith
.
AbstractMixtureScoringFunction.componentScore
with the logarithmic
scores of the components given a Sequence
.
Tensor
t
with the weights defined in
weights
.
Tensor
t
with the weights defined in
weights
.
clone
to the values (or clones
of them) of this instance.
File
using a given AlphabetContainer
and a
minimal sequence length.
LinkedList
of the Class
objects for all classes
in listToFilter
that are sub-classes of
superClass
.
n
and does path
contraction.
T
that can be instantiated, i.e.
QuadraticFunction
.
x
and the value
f(x)
, starting the search at lower
.
QuadraticFunction
.
T
including interfaces and
abstract classes that are located in a package below
startPackage
.
Object.clone()
, but does not clone the
annotation.
ParameterTree
.
boolean
indicates whether free parameterization or all
parameters are used.
ParameterTree
s from their
XML representation as given in strs
.
StringBuffer
.
Parameter
from a XML representation as returned by
Parameter.toXML()
.
ParameterSet
from the XML
representation as returned by ParameterSet.toXML()
.
ConstraintValidator
from the XML representation as
returned by ConstraintValidator.toXML()
.
NumberValidator
from the XML representation as returned
by NumberValidator.toXML()
.
ReferenceConstraint
from the XML representation as
returned by ReferenceConstraint.toXML()
.
SimpleStaticConstraint
from the XML representation as
returned by SimpleStaticConstraint.toXML()
.
StorableValidator
from the XML representation as
returned by StorableValidator.toXML()
.
Result.Result(StringBuffer)
to extract the
information.
ResultSet
from its XML representation as
returned by ResultSet.toXML()
.
Storable
interface to create a scoring function from a StringBuffer
.
FSDAGModel
).Storable
.
FSDAGModel
) that can be used in a Gibbs sampling.Storable
interface.
FSDAGModelForGibbsSampling
.Storable
interface.
FSDAGModelForGibbsSampling
.
FSDAGModel
(fixed
structure directed acyclic graphical
model).Storable
.
FSDAGMParameterSet
set for a
FSDAGModel
.
FSDAGMParameterSet
instance.
FSDAGMParameterSet
from the
class that can be instantiated using this FSDAGMParameterSet
.
FSDAGMParameterSet
instance for the
specified class.
f: R^n -> R
.ScoringFunction
s that are used to
determine the score.
ScoringFunction
s using the parameters that shall be
penalized.
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