|
||||||||||
PREV NEXT | FRAMES NO FRAMES |
Packages that use DoubleList | |
---|---|
de.jstacs.scoringFunctions | Provides ScoringFunction s that can be used in a ScoreClassifier . |
de.jstacs.scoringFunctions.directedGraphicalModels | Provides ScoringFunction s that are equivalent to directed graphical models. |
de.jstacs.scoringFunctions.homogeneous | Provides ScoringFunction s that are homogeneous, i.e. model probabilities or scores independent of the position within a sequence |
de.jstacs.scoringFunctions.mix | Provides ScoringFunction s that are mixtures of other ScoringFunction s. |
Uses of DoubleList in de.jstacs.scoringFunctions |
---|
Methods in de.jstacs.scoringFunctions with parameters of type DoubleList | |
---|---|
abstract double |
VariableLengthScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
int length,
IntList indices,
DoubleList dList)
This method computes the logarithm of the score and the partial derivations for a given subsequence. |
double |
VariableLengthScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
IntList indices,
DoubleList dList)
|
double |
UniformScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
IntList indices,
DoubleList dList)
|
double |
ScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
IntList indices,
DoubleList partialDer)
Returns the log score for the sequence and fills the list with the indices and the partial derivations. |
double |
MRFScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
IntList indices,
DoubleList partialDer)
|
double |
IndependentProductScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
IntList indices,
DoubleList partialDer)
|
double |
ScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
IntList indices,
DoubleList partialDer)
Returns the log score for the sequence and fills the list with the indices and the partial derivations. |
double |
AbstractNormalizableScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
IntList indices,
DoubleList partialDer)
|
Uses of DoubleList in de.jstacs.scoringFunctions.directedGraphicalModels |
---|
Methods in de.jstacs.scoringFunctions.directedGraphicalModels with parameters of type DoubleList | |
---|---|
double |
BayesianNetworkScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
IntList indices,
DoubleList partialDer)
|
Uses of DoubleList in de.jstacs.scoringFunctions.homogeneous |
---|
Methods in de.jstacs.scoringFunctions.homogeneous with parameters of type DoubleList | |
---|---|
double |
UniformHomogeneousScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
int length,
IntList indices,
DoubleList dList)
|
double |
HMMScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
int length,
IntList indices,
DoubleList dList)
|
double |
HMM0ScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
int length,
IntList indices,
DoubleList dList)
|
Uses of DoubleList in de.jstacs.scoringFunctions.mix |
---|
Fields in de.jstacs.scoringFunctions.mix declared as DoubleList | |
---|---|
protected DoubleList[] |
AbstractMixtureScoringFunction.dList
This array contains some DoubleList s that are used while computing the partial derivation |
Methods in de.jstacs.scoringFunctions.mix with parameters of type DoubleList | |
---|---|
double |
MixtureScoringFunction.getLogScoreAndPartialDerivation(Sequence seq,
int start,
IntList indices,
DoubleList partialDer)
|
|
||||||||||
PREV NEXT | FRAMES NO FRAMES |