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Packages that use WrongSequenceTypeException | |
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de.jstacs.data.sequences | Provides classes for representing sequences. |
de.jstacs.models.utils |
Uses of WrongSequenceTypeException in de.jstacs.data.sequences |
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Constructors in de.jstacs.data.sequences that throw WrongSequenceTypeException | |
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ArbitrarySequence(AlphabetContainer alphabetContainer,
double[] content)
This constructor is designed for the emitSample( int n ) of AbstractModel . |
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ArbitrarySequence(AlphabetContainer alphabetContainer,
SequenceAnnotation[] annotation,
String sequence,
String delim)
Creates a new sequence from a string representation using the delimiter delim . |
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ArbitrarySequence(AlphabetContainer alphabetContainer,
SequenceAnnotation[] annotation,
SymbolExtractor extractor)
Creates a new sequence from a SymbolExctractor. |
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ArbitrarySequence(AlphabetContainer alphabetContainer,
String sequence)
Creates a new sequence from a string representation using the default delimiter. |
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ByteSequence(AlphabetContainer alphabetContainer,
byte[] content)
This constructor is designed for the emitSample( int n ) of AbstractModel . |
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ByteSequence(AlphabetContainer alphabetContainer,
SequenceAnnotation[] annotation,
String sequence,
String delim)
Creates a new sequence from a string representation using the delimiter delim . |
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ByteSequence(AlphabetContainer alphabetContainer,
SequenceAnnotation[] annotation,
SymbolExtractor extractor)
Creates a new sequence from a SymbolExctractor. |
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ByteSequence(AlphabetContainer alphabetContainer,
String sequence)
Creates a new sequence from a string representation using the default delimiter. |
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IntSequence(AlphabetContainer alphabetContainer,
int[] content)
This constructor is designed for Model.emitSample(int, int...) . |
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IntSequence(AlphabetContainer alphabetContainer,
int[] content,
int start,
int length)
This constructor creates an instance from a part of the content. |
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IntSequence(AlphabetContainer alphabetContainer,
SequenceAnnotation[] annotation,
String sequence,
String delim)
Creates a new sequence from a string representation using the delimiter delim . |
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IntSequence(AlphabetContainer alphabetContainer,
SequenceAnnotation[] annotation,
SymbolExtractor extractor)
Creates a new sequence from a SymbolExctractor. |
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IntSequence(AlphabetContainer alphabetContainer,
String sequence)
Creates a new sequence from a string representation using the default delimiter. |
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ShortSequence(AlphabetContainer alphabetContainer,
SequenceAnnotation[] annotation,
String sequence,
String delim)
Creates a new sequence from a string representation using the delimiter delim . |
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ShortSequence(AlphabetContainer alphabetContainer,
SequenceAnnotation[] annotation,
SymbolExtractor extractor)
Creates a new sequence from a SymbolExctractor. |
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ShortSequence(AlphabetContainer alphabetContainer,
short[] content)
This constructor is designed for the emitSample( int n ) of AbstractModel . |
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ShortSequence(AlphabetContainer alphabetContainer,
String sequence)
Creates a new sequence from a string representation using the default delimiter. |
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SparseSequence(AlphabetContainer alphCon,
String seq)
This constructor creates an instance from a String. |
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SparseSequence(AlphabetContainer alphCon,
SymbolExtractor se)
This constructor creates an instance from a SymbolExtractor. |
Uses of WrongSequenceTypeException in de.jstacs.models.utils |
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Methods in de.jstacs.models.utils that throw WrongSequenceTypeException | |
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Sequence |
ModelTester.SeqIterator.getSequence()
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