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U

UniformHomogeneousScoringFunction - Class in de.jstacs.scoringFunctions.homogeneous
This scoring function does nothing.
UniformHomogeneousScoringFunction(AlphabetContainer, double) - Constructor for class de.jstacs.scoringFunctions.homogeneous.UniformHomogeneousScoringFunction
This is the main constructor that creates an instance that models each sequence uniformly.
UniformHomogeneousScoringFunction(StringBuffer) - Constructor for class de.jstacs.scoringFunctions.homogeneous.UniformHomogeneousScoringFunction
This is the constructor for Storable.
UniformModel - Class in de.jstacs.models
This class represents an uniform model.
UniformModel(AlphabetContainer) - Constructor for class de.jstacs.models.UniformModel
 
UniformModel(StringBuffer) - Constructor for class de.jstacs.models.UniformModel
The constructor for the Storable interface.
UniformScoringFunction - Class in de.jstacs.scoringFunctions
This scoring function does nothing.
UniformScoringFunction(AlphabetContainer, int, double) - Constructor for class de.jstacs.scoringFunctions.UniformScoringFunction
The main constructor.
UniformScoringFunction(StringBuffer) - Constructor for class de.jstacs.scoringFunctions.UniformScoringFunction
This is the constructor for Storable.
union(int, int) - Method in class de.jstacs.algorithms.graphs.UnionFind
This method unions the tree that includes the node k1 with the tree that includes node k2.
union(Sample[], boolean[]) - Static method in class de.jstacs.data.Sample
This method unites all Sample from s regarding in.
union(Sample...) - Static method in class de.jstacs.data.Sample
Unites all samples in s
union(Sample[], boolean[], int) - Static method in class de.jstacs.data.Sample
This method unites all Sample from s regarding in and sets the element length in the united sample to subsequenceLength.
union(Sample[], int) - Static method in class de.jstacs.data.Sample
This method unites all Sample from s and sets the element length in the united sample to subsequenceLength.
union(double[][]) - Static method in class de.jstacs.scoringFunctions.directedGraphicalModels.structureLearning.measures.Measure
Linearizes the arrays in ar to form a new, one-dimensional array.
UnionFind - Class in de.jstacs.algorithms.graphs
This class implements an Union-Find-algorithm with path contraction.
UnionFind(int) - Constructor for class de.jstacs.algorithms.graphs.UnionFind
Creates a new Union-Find-datastructure with size nodes.
UnivariateRandomGenerator - Class in de.jstacs.utils.random
This class is a random generator for pseudo-random numbers.
UnivariateRandomGenerator() - Constructor for class de.jstacs.utils.random.UnivariateRandomGenerator
 
UNKNOWN - Static variable in class de.jstacs.classifier.scoringFunctionBased.logPrior.LogPrior
Sometimes the method getDimensionOfScope() can not return a value.
UNKNOWN - Static variable in interface de.jstacs.scoringFunctions.ScoringFunction
Indicates that the number of parameters of this ScoringFunction is not known (yet).
unset() - Method in class de.jstacs.classifier.scoringFunctionBased.logPrior.SeparateGaussianLogPrior
 
unset() - Method in class de.jstacs.classifier.scoringFunctionBased.logPrior.SeparateLaplaceLogPrior
 
unset() - Method in class de.jstacs.classifier.scoringFunctionBased.logPrior.SeparateLogPrior
Resets all internally pre-computed values, e.g. the hyper-parameters for each parameter.
usedPositions - Variable in class de.jstacs.models.discrete.Constraint
The used positions
useOnlyFreeParameter() - Method in class de.jstacs.classifier.scoringFunctionBased.ScoreClassifierParameterSet
This method returns true if only the free parameters shall be used.
userSelected - Variable in class de.jstacs.parameters.CollectionParameter
True if the user has selected an item
UserTime - Class in de.jstacs.utils
This is an implementation of Time that uses an native method.
UserTime() - Constructor for class de.jstacs.utils.UserTime
 
USUALLY - Static variable in class de.jstacs.io.StringExtractor
The usual comment-character is #.

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