Uses of Class
de.jstacs.scoringFunctions.homogeneous.HomogeneousScoringFunction

Packages that use HomogeneousScoringFunction
de.jstacs.scoringFunctions.homogeneous Provides ScoringFunctions that are homogeneous, i.e. model probabilities or scores independent of the position within a sequence 
 

Uses of HomogeneousScoringFunction in de.jstacs.scoringFunctions.homogeneous
 

Subclasses of HomogeneousScoringFunction in de.jstacs.scoringFunctions.homogeneous
 class HMM0ScoringFunction
          This scoring function implements a homogeneous Markov model of order zero (hMM(0)) for a fixed sequence length.
 class HMMScoringFunction
          This scoring function implements a homogeneous Markov model of arbitrary order for any sequence length.
 class UniformHomogeneousScoringFunction
          This scoring function does nothing.