Package de.jstacs.data.alphabets

Provides classes for the representation of discrete and continuous alphabets, including a DNAAlphabet for the most common case of DNA-sequences

See:
          Description

Class Summary
ComplementableDiscreteAlphabet This abstract class indicates that an alphabet can be used for to compute the complement.
ContinuousAlphabet Class for a continuous alphabet.
ContinuousAlphabet.ContinuousAlphabetParameterSet Class for the ParameterSet of a ContinuousAlphabet.
DiscreteAlphabet Class for an alphabet that consists of arbitrary Strings.
DiscreteAlphabet.DiscreteAlphabetParameterSet Class for the ParameterSet of a DiscreteAlphabet.
DNAAlphabet This class implements the alphabet that is used for DNA.
DNAAlphabet.DNAAlphabetParameterSet The parameter set for an DNA alphabet.
 

Exception Summary
DoubleSymbolException A DoubleSymbolException is thrown if a symbol occured more than once in the Alphabet.
 

Package de.jstacs.data.alphabets Description

Provides classes for the representation of discrete and continuous alphabets, including a DNAAlphabet for the most common case of DNA-sequences.