Uses of Interface
de.jstacs.InstantiableFromParameterSet

Packages that use InstantiableFromParameterSet
de.jstacs.data Provides classes for the representation of data. 
de.jstacs.data.alphabets Provides classes for the representation of discrete and continuous alphabets, including a DNAAlphabet for the most common case of DNA-sequences 
de.jstacs.io Provides classes for reading data from and writing to a file and storing a number of datatypes, including all primitives, arrays of primitives, and Storables to an XML-representation 
de.jstacs.models.discrete   
de.jstacs.models.discrete.inhomogeneous This package contains various inhomogeneous models. 
de.jstacs.models.mixture.gibbssampling This package contains many classes that can be used while a Gibbs sampling. 
de.jstacs.parameters This package provides classes for parameters that establish a general convention for the description of parameters as defined in the Parameter-interface. 
 

Uses of InstantiableFromParameterSet in de.jstacs.data
 

Classes in de.jstacs.data that implement InstantiableFromParameterSet
 class Alphabet
          Class for an Alphabet.
 class AlphabetContainer
          The container for some alphabets used in a sequence, sample, model or ... .
 

Uses of InstantiableFromParameterSet in de.jstacs.data.alphabets
 

Classes in de.jstacs.data.alphabets that implement InstantiableFromParameterSet
 class ComplementableDiscreteAlphabet
          This abstract class indicates that an alphabet can be used for to compute the complement.
 class ContinuousAlphabet
          Class for a continuous alphabet.
 class DiscreteAlphabet
          Class for an alphabet that consists of arbitrary Strings.
 class DNAAlphabet
          This class implements the alphabet that is used for DNA.
 

Uses of InstantiableFromParameterSet in de.jstacs.io
 

Methods in de.jstacs.io that return InstantiableFromParameterSet
static InstantiableFromParameterSet ParameterSetParser.getInstanceFromParameterSet(ParameterSet pars)
          Returns an instance of a subclass of InstantiableFromParameterSet that can be instantiated by the ParameterSet pars.
static InstantiableFromParameterSet ParameterSetParser.getInstanceFromParameterSet(ParameterSet pars, Class instanceClass)
          Returns an instance of a subclass of InstantiableFromParameterSet that can be instantiated by the ParameterSet pars.
 

Uses of InstantiableFromParameterSet in de.jstacs.models.discrete
 

Classes in de.jstacs.models.discrete that implement InstantiableFromParameterSet
 class DiscreteGraphicalModel
          This is the main class for all discrete graphical models (DGM)
 

Uses of InstantiableFromParameterSet in de.jstacs.models.discrete.inhomogeneous
 

Classes in de.jstacs.models.discrete.inhomogeneous that implement InstantiableFromParameterSet
 class BayesianNetworkModel
          The class implements a Bayesian network of fixed order.
 class DAGModel
          The abstract class for directed acyclic graphical models.
 class FSDAGModel
          This class can be used for any discrete fixed structure DAG model (FSDAGModel).
 class InhomogeneousDGM
          This class is the main class for all inhomgeneous discrete graphical models (IDGM).
 

Uses of InstantiableFromParameterSet in de.jstacs.models.mixture.gibbssampling
 

Classes in de.jstacs.models.mixture.gibbssampling that implement InstantiableFromParameterSet
 class FSDAGModelForGibbsSampling
          This is the class for a fixed structure directed acyclic graphical model that can be used in a Gibbs sampling.
 

Uses of InstantiableFromParameterSet in de.jstacs.parameters
 

Methods in de.jstacs.parameters that return InstantiableFromParameterSet
 InstantiableFromParameterSet ParameterSet.getInstance()
          Returns a new instance of the class of getInstanceClass() that was created using this ParameterSet.