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Packages that use Alignment.Costs | |
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de.jstacs.algorithms | Provides classes for algorithms on graphs. |
Uses of Alignment.Costs in de.jstacs.algorithms |
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Classes in de.jstacs.algorithms that implement Alignment.Costs | |
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static class |
Alignment.SimpleCosts
Class for simple costs with costs mismatch for a mismatch,
costs start to start a new gap, costs elong to
elongate a gap by one position and costs of 0 for a match. |
Constructors in de.jstacs.algorithms with parameters of type Alignment.Costs | |
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Alignment(Sequence s1,
Sequence s2,
Alignment.Costs costs)
Creates a new Alignment.StringAlignment instance that aligns the sequences
s1 and s2 using the costs defined in
costs . |
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