Uses of Package
de.jstacs.scoringFunctions.mix.motifSearch

Packages that use de.jstacs.scoringFunctions.mix.motifSearch
de.jstacs.scoringFunctions.directedGraphicalModels Provides ScoringFunctions that are equivalent to directed graphical models. 
de.jstacs.scoringFunctions.mix.motifSearch   
 

Classes in de.jstacs.scoringFunctions.mix.motifSearch used by de.jstacs.scoringFunctions.directedGraphicalModels
DurationScoringFunction
          This class is the super class for all one dimensional position scoring functions that can be used as durations for semi Markov models.
 

Classes in de.jstacs.scoringFunctions.mix.motifSearch used by de.jstacs.scoringFunctions.mix.motifSearch
DurationScoringFunction
          This class is the super class for all one dimensional position scoring functions that can be used as durations for semi Markov models.
HiddenMotifsMixture
          This class handles mixtures with at least one hidden motif.
MixtureDuration
          This class implements a mixture of DurationScoringFunctions.
PositionScoringFunction
          This class implements a position scoring function that enables the user to get a score without using a Sequence object.
SkewNormalLikeScoringFunction
          This class implements a skew normal like discrete truncated distribution.