**BismarkMerge2Files** merges files generated by Bismark methylation extractor_ with parameters ``–bedGraph –CX -p``.
The output contains a coverage file, which contains the tab-separated columns:
``chromosome, start_position, end_position, methylation_percentage, count_methylated, count_unmethylated``.

The input of **BismarkMerge2Files** are two Bismark coverage files.

If you experience problems using **BismarkMerge2Files**, please contact_ us.

.. _contact: mailto:grau@informatik.uni-halle.de
.. _Bismark methylation extractor: https://www.bioinformatics.babraham.ac.uk/projects/bismark/