**PileupConvertToPromoter** converts the pileup output file to promoter coordinates.

The input of **PileupConvertToPromoter** is 
1. a normalized pileup output file from **NormalizePileupOutput** tool and 
2. the promoter sequences in FastA format with headers like:
``> id chromosomeName:start-end:strand``
e.g.
``> Os01g01010.1 Chr1:2602-3102:+``.

If you experience problems using **PileupConvertToPromoter**, please contact_ us.

.. _contact: mailto:grau@informatik.uni-halle.de