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Z

zip(String) - Static method in class de.jstacs.utils.Compression

Compresses the supplied original String.

ZOOPSTrainSM - Class in de.jstacs.sequenceScores.statisticalModels.trainable.mixture.motif

This class enables the user to search for a single motif in a sequence.

ZOOPSTrainSM(TrainableStatisticalModel, TrainableStatisticalModel, boolean, int, double[], double[], PositionPrior, AbstractMixtureTrainSM.Algorithm, double, TerminationCondition, AbstractMixtureTrainSM.Parameterization, int, int, BurnInTest) - Constructor for class de.jstacs.sequenceScores.statisticalModels.trainable.mixture.motif.ZOOPSTrainSM

Creates a new ZOOPSTrainSM.

ZOOPSTrainSM(TrainableStatisticalModel, TrainableStatisticalModel, boolean, int, double[], PositionPrior, double, TerminationCondition, AbstractMixtureTrainSM.Parameterization) - Constructor for class de.jstacs.sequenceScores.statisticalModels.trainable.mixture.motif.ZOOPSTrainSM

Creates a new ZOOPSTrainSM using EM and estimating the probability for finding a motif.

ZOOPSTrainSM(TrainableStatisticalModel, TrainableStatisticalModel, boolean, int, double, PositionPrior, double, TerminationCondition, AbstractMixtureTrainSM.Parameterization) - Constructor for class de.jstacs.sequenceScores.statisticalModels.trainable.mixture.motif.ZOOPSTrainSM

Creates a new ZOOPSTrainSM using EM and fixed probability for finding a motif.

ZOOPSTrainSM(StringBuffer) - Constructor for class de.jstacs.sequenceScores.statisticalModels.trainable.mixture.motif.ZOOPSTrainSM

The standard constructor for the interface Storable.

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