| Class | Description |
|---|---|
| DeBruijnMotifComparison |
Helper class for comparisons of motif models based on De Bruijn sequences.
|
| DistanceMetric<T> |
This abstract class defined a DistanceMetric (which may be used for clustering) on a generic type
T. |
| PearsonCorrelationDistanceMetric |
Implements a distance metric based on the Pearson correlation of two double vectors.
|
| RandomSequenceScoreDistance |
Class for a distance metric between
StatisticalModels based on the correlation of score
profiles on random sequences. |
| SequenceScoreDistance |
Class for a distance metric between
StatisticalModels based on the correlation of score
profiles on De Bruijn sequences. |