Class | Description |
---|---|
DeBruijnMotifComparison |
Helper class for comparisons of motif models based on De Bruijn sequences.
|
DistanceMetric<T> |
This abstract class defined a DistanceMetric (which may be used for clustering) on a generic type
T . |
PearsonCorrelationDistanceMetric |
Implements a distance metric based on the Pearson correlation of two double vectors.
|
RandomSequenceScoreDistance |
Class for a distance metric between
StatisticalModel s based on the correlation of score
profiles on random sequences. |
SequenceScoreDistance |
Class for a distance metric between
StatisticalModel s based on the correlation of score
profiles on De Bruijn sequences. |