de.jstacs.motifDiscovery

Class SignificantMotifOccurrencesFinder.SumOfProbabilities

java.lang.Object

de.jstacs.motifDiscovery.SignificantMotifOccurrencesFinder.SumOfProbabilities

All Implemented Interfaces:

SignificantMotifOccurrencesFinder.JoinMethod

Enclosing class:

SignificantMotifOccurrencesFinder

public static class SignificantMotifOccurrencesFinder.SumOfProbabilities
extends Object
implements SignificantMotifOccurrencesFinder.JoinMethod

Joins several profiles containing log-probabilities into one profile containing the logarithm of the sum of the probabilities of the single profiles.

Author:

Jan Grau

Constructor Summary

Constructors

Constructor and Description
SumOfProbabilities()

Method Summary

Modifier and Type	Method and Description
double[]	joinProfiles(double[][] profiles) Joins the profiles in profiles into a common profile, where each line of profiles corresponds to one profile to be joined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SumOfProbabilities

public SumOfProbabilities()

Method Detail

joinProfiles

public double[] joinProfiles(double[][] profiles)

Description copied from interface: SignificantMotifOccurrencesFinder.JoinMethod

Joins the profiles in profiles into a common profile, where each line of profiles corresponds to one profile to be joined

Specified by:

joinProfiles in interface SignificantMotifOccurrencesFinder.JoinMethod

Parameters:

profiles - the profiles to be joined

Returns:

the joined profiles