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## Uses of Class
de.jstacs.algorithms.alignment.cost.AffineCosts

Packages that use AffineCosts
de.jstacs.algorithms.alignment.cost | Provides classes for cost functions used in alignments

Uses of AffineCosts in de.jstacs.algorithms.alignment.cost

Subclasses of AffineCosts in de.jstacs.algorithms.alignment.cost
`class` | `MatrixCosts` Class for matrix costs, i.e., the cost of any match/mismatch is stored in a matrix allowing a huge degree of freedom.
`class` | `SimpleCosts` Class for simple costs with costs `mismatch` for a mismatch, costs `start` to start a new gap, costs `elong` to elongate a gap by one position and costs of `match` for a match.

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