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## Uses of Class
de.jstacs.results.ResultSet

Packages that use ResultSet
de.jstacs.classifier | This package provides the framework for any classifier.
de.jstacs.classifier.modelBased | Provides the classes for `Classifier`s that are based on `Model`s
de.jstacs.data.sequences.annotation | Provides the facilities to annotate `Sequence`s using a number of pre-defined annotation types, or additional implementations of the `SequenceAnnotation` class
de.jstacs.models | Provides the interface `Model` and its abstract implementation `AbstractModel`, which is the super class of all other models.
de.jstacs.models.hmm.models | The package provides different implementations of hidden Markov models based on `AbstractHMM`
de.jstacs.models.mixture | This package is the super package for any mixture model.
de.jstacs.results | This package provides classes for results and sets of results.
de.jstacs.utils.galaxy |

Uses of ResultSet in de.jstacs.classifier

Methods in de.jstacs.classifier that return ResultSet
`ResultSet` | `AbstractClassifier.evaluateAll(MeasureParameters params, boolean exceptionIfNotComputeable, Sample... s)` This method evaluates the classifier and computes all results.
`ResultSet` | `AbstractClassifier.getCharacteristics()` Returns some information characterizing or describing the current instance of the classifier.

Uses of ResultSet in de.jstacs.classifier.modelBased

Methods in de.jstacs.classifier.modelBased that return ResultSet
`ResultSet` | `ModelBasedClassifier.getCharacteristics()`

Uses of ResultSet in de.jstacs.data.sequences.annotation

Subclasses of ResultSet in de.jstacs.data.sequences.annotation
`class` | `CisRegulatoryModuleAnnotation` Annotation for a cis-regulatory module as defined by a set of `MotifAnnotation`s of the motifs in the module.
`class` | `IntronAnnotation` Annotation class for an intron as defined by a donor and an acceptor splice site.
`class` | `LocatedSequenceAnnotation` Class for a `SequenceAnnotation` that has a position on the sequence, e.g for transcription start sites or intron-exon junctions.
`class` | `LocatedSequenceAnnotationWithLength` Class for a `SequenceAnnotation` that has a position on the sequence and a length, e.g. for donor splice sites, exons or genes.
`class` | `MotifAnnotation` Class for a `StrandedLocatedSequenceAnnotationWithLength` that is a motif.
`class` | `ReferenceSequenceAnnotation` This class implements a `SequenceAnnotation` that contains a reference sequence.
`class` | `SequenceAnnotation` Class for a general annotation of a `Sequence`.
`class` | `SinglePositionSequenceAnnotation` Class for some annotations that consist mainly of one position on a sequence.
`class` | `StrandedLocatedSequenceAnnotationWithLength` Class for a `SequenceAnnotation` that has a position, a length and an orientation on the strand of a `Sequence`.

Uses of ResultSet in de.jstacs.models

Methods in de.jstacs.models that return ResultSet
`ResultSet` | `Model.getCharacteristics()` Returns some information characterizing or describing the current instance of the model.
`ResultSet` | `CompositeModel.getCharacteristics()`
`ResultSet` | `AbstractModel.getCharacteristics()`

Uses of ResultSet in de.jstacs.models.hmm.models

Methods in de.jstacs.models.hmm.models that return ResultSet
`ResultSet` | `HigherOrderHMM.getCharacteristics()`

Uses of ResultSet in de.jstacs.models.mixture

Methods in de.jstacs.models.mixture that return ResultSet
`ResultSet` | `AbstractMixtureModel.getCharacteristics()`

Uses of ResultSet in de.jstacs.results

Subclasses of ResultSet in de.jstacs.results
`class` | `MeanResultSet` Class that computes the mean and the standard error of a series of `NumericalResultSet`s.
`class` | `NumericalResultSet` Class for a set of numerical result values, which are all of the type `NumericalResult`.

Fields in de.jstacs.results declared as ResultSet
`protected ResultSet[]` | `ListResult.list` The internal list of `ResultSet`s that are part of this `ListResult`

Methods in de.jstacs.results that return ResultSet
`ResultSet` | `ListResult.getAnnotation()` Returns a reference to the annotation of this `ListResult`.
`ResultSet` | `MeanResultSet.getInfos()` Returns some information for this `MeanResultSet`.
`ResultSet[]` | `ListResult.getRawResult()` Returns a copy of the internal list of `ResultSet`s.
`ResultSet[]` | `ListResult.getResult()`

Constructors in de.jstacs.results with parameters of type ResultSet
`ListResult(String name, String comment, ResultSet annotation, ResultSet... results)` Creates a new `ListResult` from an array of `ResultSet`s and a `ResultSet` of annotations, which may provide additional information on this `ListResult`.
`ListResult(String name, String comment, ResultSet annotation, ResultSet... results)` Creates a new `ListResult` from an array of `ResultSet`s and a `ResultSet` of annotations, which may provide additional information on this `ListResult`.

Uses of ResultSet in de.jstacs.utils.galaxy

Methods in de.jstacs.utils.galaxy with parameters of type ResultSet
`void` | `GalaxyAdaptor.addResultSet(ResultSet res, boolean exportAll, boolean includeInSummary)` Adds a set of results to the results of a program run.

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