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## Uses of Package
de.jstacs.results

Packages that use de.jstacs.results
de.jstacs.classifiers | This package provides the framework for any classifier.
de.jstacs.classifiers.assessment | This package allows to assess classifiers.
de.jstacs.classifiers.differentiableSequenceScoreBased | Provides the classes for `Classifier`s that are based on `SequenceScore`s.
de.jstacs.classifiers.differentiableSequenceScoreBased.sampling | Provides the classes for `AbstractScoreBasedClassifier`s that are based on `SamplingDifferentiableStatisticalModel`s and that sample parameters using the Metropolis-Hastings algorithm.
de.jstacs.classifiers.performanceMeasures | This package provides the implementations of performance measures that can be used to assess any classifier
de.jstacs.classifiers.trainSMBased | Provides the classes for `Classifier`s that are based on `TrainableStatisticalModel`s
de.jstacs.classifiers.utils | Provides some useful classes for working with classifiers
de.jstacs.data | Provides classes for the representation of data.
de.jstacs.data.sequences.annotation | Provides the facilities to annotate `Sequence`s using a number of pre-defined annotation types, or additional implementations of the `SequenceAnnotation` class
de.jstacs.motifDiscovery | This package provides the framework including the interface for any de novo motif discoverer
de.jstacs.results | This package provides classes for results and sets of results.
de.jstacs.sequenceScores | Provides all `SequenceScore`s, which can be used to score a `Sequence`, typically using some model assumptions.
de.jstacs.sequenceScores.differentiable |
de.jstacs.sequenceScores.statisticalModels.trainable | Provides all `TrainableStatisticalModel`s, which can be learned from a single `DataSet`.
de.jstacs.sequenceScores.statisticalModels.trainable.discrete.homogeneous |
de.jstacs.sequenceScores.statisticalModels.trainable.discrete.inhomogeneous | This package contains various inhomogeneous models.
de.jstacs.sequenceScores.statisticalModels.trainable.discrete.inhomogeneous.shared |
de.jstacs.sequenceScores.statisticalModels.trainable.hmm.models | The package provides different implementations of hidden Markov models based on `AbstractHMM`
de.jstacs.sequenceScores.statisticalModels.trainable.mixture | This package is the super package for any mixture model.
de.jstacs.utils.galaxy |

Classes in de.jstacs.results used by de.jstacs.classifiers
CategoricalResult A class for categorical results (i.e. non-numerical results) for primitives and `String`s.
ImageResult A class for results that are images of the PNG format.
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.
Result The abstract class for any result.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.

Classes in de.jstacs.results used by de.jstacs.classifiers.assessment
ListResult Class for a `Result` that contains a list or a matrix, respectively, of `ResultSet`s.
MeanResultSet Class that computes the mean and the standard error of a series of `NumericalResultSet`s.
MeanResultSet.AdditionImpossibleException Class for the exception that is thrown if two `MeanResultSet`s should be added that do not match.
MeanResultSet.InconsistentResultNumberException Class for the exception that is thrown if a `NumericalResultSet` is added to the `MeanResultSet` that has a number of results which is not equal to the number of results of the previously added results.
Result The abstract class for any result.

Classes in de.jstacs.results used by de.jstacs.classifiers.differentiableSequenceScoreBased
CategoricalResult A class for categorical results (i.e. non-numerical results) for primitives and `String`s.
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.

Classes in de.jstacs.results used by de.jstacs.classifiers.differentiableSequenceScoreBased.sampling
CategoricalResult A class for categorical results (i.e. non-numerical results) for primitives and `String`s.
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.

Classes in de.jstacs.results used by de.jstacs.classifiers.performanceMeasures
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.

Classes in de.jstacs.results used by de.jstacs.classifiers.trainSMBased
CategoricalResult A class for categorical results (i.e. non-numerical results) for primitives and `String`s.
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.

Classes in de.jstacs.results used by de.jstacs.classifiers.utils
ImageResult A class for results that are images of the PNG format.

Classes in de.jstacs.results used by de.jstacs.data
ImageResult A class for results that are images of the PNG format.

Classes in de.jstacs.results used by de.jstacs.data.sequences.annotation
Result The abstract class for any result.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.

Classes in de.jstacs.results used by de.jstacs.motifDiscovery
ImageResult A class for results that are images of the PNG format.
ListResult Class for a `Result` that contains a list or a matrix, respectively, of `ResultSet`s.

Classes in de.jstacs.results used by de.jstacs.results
ListResult Class for a `Result` that contains a list or a matrix, respectively, of `ResultSet`s.
MeanResultSet Class that computes the mean and the standard error of a series of `NumericalResultSet`s.
MeanResultSet.AdditionImpossibleException Class for the exception that is thrown if two `MeanResultSet`s should be added that do not match.
MeanResultSet.InconsistentResultNumberException Class for the exception that is thrown if a `NumericalResultSet` is added to the `MeanResultSet` that has a number of results which is not equal to the number of results of the previously added results.
NumericalResult Class for numerical `Result` values.
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.
Result The abstract class for any result.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.
SimpleResult Abstract class for a `Result` with a value of a primitive data type or `String`.

Classes in de.jstacs.results used by de.jstacs.sequenceScores
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.

Classes in de.jstacs.results used by de.jstacs.sequenceScores.differentiable
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.

Classes in de.jstacs.results used by de.jstacs.sequenceScores.statisticalModels.trainable
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.

Classes in de.jstacs.results used by de.jstacs.sequenceScores.statisticalModels.trainable.discrete.homogeneous
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.

Classes in de.jstacs.results used by de.jstacs.sequenceScores.statisticalModels.trainable.discrete.inhomogeneous
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.

Classes in de.jstacs.results used by de.jstacs.sequenceScores.statisticalModels.trainable.discrete.inhomogeneous.shared
CategoricalResult A class for categorical results (i.e. non-numerical results) for primitives and `String`s.

Classes in de.jstacs.results used by de.jstacs.sequenceScores.statisticalModels.trainable.hmm.models
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.

Classes in de.jstacs.results used by de.jstacs.sequenceScores.statisticalModels.trainable.mixture
NumericalResultSet Class for a set of numerical result values, which are all of the type `NumericalResult`.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.

Classes in de.jstacs.results used by de.jstacs.utils.galaxy
ImageResult A class for results that are images of the PNG format.
Result The abstract class for any result.
ResultSet Class for a set of `Result`s which provides methods to access single `Result`s in the set, to retrieve the number of `Result`s in the set, to get a `String` representation or an XML representation of all the `Result`s in the set.

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