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## Uses of Class
de.jstacs.parameters.Parameter

Packages that use Parameter
de.jstacs.io | Provides classes for reading data from and writing to a file and storing a number of datatypes, including all primitives, arrays of primitives, and `Storable`s to an XML-representation
de.jstacs.parameters | This package provides classes for parameters that establish a general convention for the description of parameters as defined in the `Parameter`-interface.

Uses of Parameter in de.jstacs.io

Methods in de.jstacs.io with parameters of type Parameter
`static boolean` | `ParameterSetParser.getBooleanFromParameter(Parameter par)` Returns the `boolean` which is the value of the `Parameter` `par`.
`static byte` | `ParameterSetParser.getByteFromParameter(Parameter par)` Returns the `byte` which is the value of the `Parameter` `par`.
`static double` | `ParameterSetParser.getDoubleFromParameter(Parameter par)` Returns the `double` which is the value of the `Parameter` `par`.
`static float` | `ParameterSetParser.getFloatFromParameter(Parameter par)` Returns the `float` which is the value of the `Parameter` `par`.
`static int` | `ParameterSetParser.getIntFromParameter(Parameter par)` Returns the `int` which is the value of the `Parameter` `par`.
`static long` | `ParameterSetParser.getLongFromParameter(Parameter par)` Returns the `long` which is the value of the `Parameter` `par`.
`static short` | `ParameterSetParser.getShortFromParameter(Parameter par)` Returns the `short` which is the value of the `Parameter` `par`.
`static String` | `ParameterSetParser.getStringFromParameter(Parameter par)` Returns the `String` which is the value of the `Parameter` `par`.

Uses of Parameter in de.jstacs.parameters

Subclasses of Parameter in de.jstacs.parameters
`class` | `AbstractSelectionParameter` Class for a collection parameter, i.e. a parameter that provides some collection of possible values the user can choose from.
`class` | `EnumParameter` This class implements a `SelectionParameter` based on an `Enum`.
`class` | `FileParameter` Class for a `Parameter` that represents a local file.
`class` | `MultiSelectionParameter` Class for a `Parameter` that provides a collection of possible values.
`class` | `ParameterSetContainer` Class for a `ParameterSetContainer` that contains a `ParameterSet` as value.
`class` | `RangeParameter` Class for a parameter wrapper that allows `SimpleParameter`s to be set to a set of values.
`class` | `SelectionParameter` Class for a collection parameter, i.e. a parameter that provides some collection of possible values the user can choose from.
`class` | `SimpleParameter` Class for a "simple" parameter.

Fields in de.jstacs.parameters declared as Parameter
`protected Parameter` | `SequenceScoringParameterSet.alphabet` The alphabet the model works on
`protected Parameter` | `SequenceScoringParameterSet.length` The length of sequences the model can work on or `0` for arbitrary length

Methods in de.jstacs.parameters that return Parameter
`Parameter` | `Parameter.clone()`
`Parameter` | `SequenceScoringParameterSet.getParameterAt(int i)`
`Parameter` | `ParameterSet.getParameterAt(int i)` Returns the `Parameter` at position `i`.
`Parameter` | `ArrayParameterSet.getParameterAt(int i)`
`Parameter` | `ParameterSet.getParameterForName(String name)` Returns the `Parameter` with name `name`.
`Parameter` | `ParameterSetTagger.getParameterFromTag(String tag)` This method returns the `Parameter` specified by the `tag`
`Parameter` | `SimpleParameter.getRangedInstance()`
`Parameter` | `Rangeable.getRangedInstance()` Returns an instance of `RangeIterator` that has the same properties as the current instance, but accepts a range or list of values.

Methods in de.jstacs.parameters with parameters of type Parameter
`void` | `ParameterSet.ParameterList.add(int idx, Parameter p)`
`void` | `ParameterSet.ParameterList.add(Parameter... p)`
`boolean` | `Parameter.isComparable(Parameter p)` This method checks whether the given `Parameter` is comparable to the current instance, i.e. whether the `Class`, the `DataType`, the name and the comment are identical.
`void` | `ParameterSet.ParameterList.set(int idx, Parameter p)`

Method parameters in de.jstacs.parameters with type arguments of type Parameter
`String` | `ParameterSetTagger.toString(Comparator<Map.Entry<String,ComparableElement<Parameter,Integer>>> ec)` This method allows to get a String representation where the tagged parameters are sorted in some specific way.

Constructors in de.jstacs.parameters with parameters of type Parameter
`ParameterSet(Parameter[] parameters)` Constructs a `ParameterSet` out of an array of `Parameter`s.
`SimpleParameterSet(Parameter... parameters)` Creates a new `SimpleParameterSet` from an array of `Parameter`s.

Constructor parameters in de.jstacs.parameters with type arguments of type Parameter
`ParameterSet(ArrayList<Parameter> parameters)` Constructs a `ParameterSet` out of an `ArrayList` of `Parameter`s.

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