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## Uses of Class
de.jstacs.sequenceScores.statisticalModels.trainable.hmm.HMMFactory.HMMType

Packages that use HMMFactory.HMMType
de.jstacs.sequenceScores.statisticalModels.trainable.hmm | The package provides all interfaces and classes for a hidden Markov model (HMM).

Uses of HMMFactory.HMMType in de.jstacs.sequenceScores.statisticalModels.trainable.hmm

Methods in de.jstacs.sequenceScores.statisticalModels.trainable.hmm that return HMMFactory.HMMType
`static HMMFactory.HMMType` | `HMMFactory.HMMType.valueOf(String name)` Returns the enum constant of this type with the specified name.
`static HMMFactory.HMMType[]` | `HMMFactory.HMMType.values()` Returns an array containing the constants of this enum type, in the order they are declared.

Methods in de.jstacs.sequenceScores.statisticalModels.trainable.hmm with parameters of type HMMFactory.HMMType
`static AbstractHMM` | `HMMFactory.createProfileHMM(MaxHMMTrainingParameterSet trainingParameterSet, HMMFactory.HMMType type, boolean likelihood, int order, int numLayers, AlphabetContainer con, double ess, boolean conditionalMain, boolean closeCircle, double[][] conditionInitProbs)` Creates a new profile HMM for a given architecture and number of layers.

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