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## de.jstacs.sequenceScores.statisticalModels.differentiable.directedGraphicalModels.structureLearning.measures
Class InhomogeneousMarkov.InhomogeneousMarkovParameterSet

    java.lang.Object
      de.jstacs.parameters.ParameterSet
          de.jstacs.parameters.InstanceParameterSet<Measure>
              de.jstacs.sequenceScores.statisticalModels.differentiable.directedGraphicalModels.structureLearning.measures.Measure.MeasureParameterSet
                  de.jstacs.sequenceScores.statisticalModels.differentiable.directedGraphicalModels.structureLearning.measures.InhomogeneousMarkov.InhomogeneousMarkovParameterSet

All Implemented Interfaces:
  GalaxyConvertible, Storable, Cloneable

Enclosing class:
  InhomogeneousMarkov

    public static class InhomogeneousMarkov.InhomogeneousMarkovParameterSet

extends Measure.MeasureParameterSet

Class for an `InstanceParameterSet` that defines the parameters of an `InhomogeneousMarkov` structure `Measure`.

Author:
  Jan Grau

Nested Class Summary

Nested classes/interfaces inherited from class de.jstacs.parameters.ParameterSet
`ParameterSet.ParameterList`

Field Summary

Fields inherited from class de.jstacs.parameters.ParameterSet
`errorMessage, parameters, parent`

Constructor Summary
`InhomogeneousMarkov.InhomogeneousMarkovParameterSet()` Creates a new `InhomogeneousMarkov.InhomogeneousMarkovParameterSet` with empty parameter values.
`InhomogeneousMarkov.InhomogeneousMarkovParameterSet(int order)` Creates a new `InhomogeneousMarkov.InhomogeneousMarkovParameterSet` with the parameter for the order set to `order`.
`InhomogeneousMarkov.InhomogeneousMarkovParameterSet(StringBuffer representation)` Creates a new `InhomogeneousMarkov.InhomogeneousMarkovParameterSet` from its XML representation as defined by the `Storable` interface.

Method Summary
`String` | `getInstanceComment()` Returns a comment (a textual description) of the class that can be constructed using this `ParameterSet`.
`String` | `getInstanceName()` Returns the name of an instance of the class that can be constructed using this `ParameterSet`.
`int` | `getOrder()` Returns the order of the `InhomogeneousMarkov` structure measure as defined by this set of parameters.

Methods inherited from class de.jstacs.parameters.InstanceParameterSet
`fromXML, getInstance, getInstanceClass, toXML`

Methods inherited from class de.jstacs.parameters.ParameterSet
`clone, fromGalaxy, getAllParameterNames, getComment, getComment, getErrorMessage, getIndex, getName, getName, getNumberOfParameters, getParameterAt, getParameterForName, getParent, hasDefaultOrIsSet, initParameterList, initParameterList, isAtomic, isComparable, parametersLoaded, reset, setParent, toGalaxy`

Methods inherited from class java.lang.Object
`equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait`

Constructor Detail

### InhomogeneousMarkov.InhomogeneousMarkovParameterSet

    public InhomogeneousMarkov.InhomogeneousMarkovParameterSet()

  Creates a new `InhomogeneousMarkov.InhomogeneousMarkovParameterSet` with empty parameter values.

### InhomogeneousMarkov.InhomogeneousMarkovParameterSet

    public InhomogeneousMarkov.InhomogeneousMarkovParameterSet(int order)
                                                        throws SimpleParameter.IllegalValueException

  Creates a new `InhomogeneousMarkov.InhomogeneousMarkovParameterSet` with the parameter for the order set to `order`.

  Parameters:
    `order` - the order
  Throws:
    `SimpleParameter.IllegalValueException` - if the value of the order is not allowed

### InhomogeneousMarkov.InhomogeneousMarkovParameterSet

    public InhomogeneousMarkov.InhomogeneousMarkovParameterSet(StringBuffer representation)
                                                        throws NonParsableException

  Creates a new `InhomogeneousMarkov.InhomogeneousMarkovParameterSet` from its XML representation as defined by the `Storable` interface.

  Parameters:
    `representation` - the XML code as `StringBuffer`
  Throws:
    `NonParsableException` - if the XML representation could not be parsed

Method Detail

### getInstanceComment

    public String getInstanceComment()

  Description copied from class: `InstanceParameterSet`
  Returns a comment (a textual description) of the class that can be constructed using this `ParameterSet`.

  Specified by:
    `getInstanceComment` in class `InstanceParameterSet<Measure>`
  Returns:
    the comment of the class

### getInstanceName

    public String getInstanceName()

  Description copied from class: `InstanceParameterSet`
  Returns the name of an instance of the class that can be constructed using this `ParameterSet`.

  Specified by:
    `getInstanceName` in class `InstanceParameterSet<Measure>`
  Returns:
    the name of the class

### getOrder

    public int getOrder()

  Returns the order of the `InhomogeneousMarkov` structure measure as defined by this set of parameters.

  Returns:
    the order

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