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## Hierarchy For Package de.jstacs.sequenceScores.statisticalModels.differentiable

Package Hierarchies:
  All Packages

## Class Hierarchy

- java.lang.Object
  - de.jstacs.sequenceScores.differentiable.AbstractDifferentiableSequenceScore (implements de.jstacs.sequenceScores.differentiable.DifferentiableSequenceScore)
    - de.jstacs.sequenceScores.statisticalModels.differentiable.AbstractDifferentiableStatisticalModel (implements de.jstacs.sequenceScores.statisticalModels.differentiable.DifferentiableStatisticalModel)
      - de.jstacs.sequenceScores.statisticalModels.differentiable.AbstractVariableLengthDiffSM (implements de.jstacs.sequenceScores.statisticalModels.differentiable.VariableLengthDiffSM)
        - de.jstacs.sequenceScores.statisticalModels.differentiable.CyclicMarkovModelDiffSM (implements de.jstacs.sequenceScores.statisticalModels.differentiable.SamplingDifferentiableStatisticalModel)
      - de.jstacs.sequenceScores.statisticalModels.differentiable.MappingDiffSM (implements de.jstacs.motifDiscovery.Mutable, de.jstacs.motifDiscovery.MutableMotifDiscoverer)
      - de.jstacs.sequenceScores.statisticalModels.differentiable.MarkovRandomFieldDiffSM
      - de.jstacs.sequenceScores.statisticalModels.differentiable.NormalizedDiffSM (implements de.jstacs.motifDiscovery.Mutable)
    - de.jstacs.sequenceScores.differentiable.IndependentProductDiffSS
      - de.jstacs.sequenceScores.statisticalModels.differentiable.IndependentProductDiffSM (implements de.jstacs.sequenceScores.statisticalModels.differentiable.DifferentiableStatisticalModel, de.jstacs.motifDiscovery.MutableMotifDiscoverer)
    - de.jstacs.sequenceScores.statisticalModels.differentiable.MultiDimensionalSequenceWrapperDiffSM
    - de.jstacs.sequenceScores.differentiable.UniformDiffSS
      - de.jstacs.sequenceScores.statisticalModels.differentiable.UniformDiffSM (implements de.jstacs.sequenceScores.statisticalModels.differentiable.SamplingDifferentiableStatisticalModel)
  - de.jstacs.sequenceScores.statisticalModels.differentiable.DifferentiableStatisticalModelFactory

## Interface Hierarchy

- java.lang.Cloneable
  - de.jstacs.sequenceScores.SequenceScore (also extends de.jstacs.Storable)
    - de.jstacs.sequenceScores.differentiable.DifferentiableSequenceScore
      - de.jstacs.sequenceScores.statisticalModels.differentiable.DifferentiableStatisticalModel (also extends de.jstacs.sequenceScores.statisticalModels.StatisticalModel)
        - de.jstacs.sequenceScores.statisticalModels.differentiable.SamplingDifferentiableStatisticalModel
        - de.jstacs.sequenceScores.statisticalModels.differentiable.VariableLengthDiffSM
    - de.jstacs.sequenceScores.statisticalModels.StatisticalModel
      - de.jstacs.sequenceScores.statisticalModels.differentiable.DifferentiableStatisticalModel (also extends de.jstacs.sequenceScores.differentiable.DifferentiableSequenceScore)
        - de.jstacs.sequenceScores.statisticalModels.differentiable.SamplingDifferentiableStatisticalModel
        - de.jstacs.sequenceScores.statisticalModels.differentiable.VariableLengthDiffSM
- de.jstacs.Storable
  - de.jstacs.sequenceScores.SequenceScore (also extends java.lang.Cloneable)
    - de.jstacs.sequenceScores.differentiable.DifferentiableSequenceScore
      - de.jstacs.sequenceScores.statisticalModels.differentiable.DifferentiableStatisticalModel (also extends de.jstacs.sequenceScores.statisticalModels.StatisticalModel)
        - de.jstacs.sequenceScores.statisticalModels.differentiable.SamplingDifferentiableStatisticalModel
        - de.jstacs.sequenceScores.statisticalModels.differentiable.VariableLengthDiffSM
    - de.jstacs.sequenceScores.statisticalModels.StatisticalModel
      - de.jstacs.sequenceScores.statisticalModels.differentiable.DifferentiableStatisticalModel (also extends de.jstacs.sequenceScores.differentiable.DifferentiableSequenceScore)
        - de.jstacs.sequenceScores.statisticalModels.differentiable.SamplingDifferentiableStatisticalModel
        - de.jstacs.sequenceScores.statisticalModels.differentiable.VariableLengthDiffSM

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