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## Uses of Class
de.jstacs.algorithms.alignment.PairwiseStringAlignment

Packages that use PairwiseStringAlignment
de.jstacs.algorithms.alignment | Provides classes for alignments

Uses of PairwiseStringAlignment in de.jstacs.algorithms.alignment

Methods in de.jstacs.algorithms.alignment that return PairwiseStringAlignment
`PairwiseStringAlignment` | `Alignment.getAlignment(Sequence s1, int startS1, int endS1, Sequence s2, int startS2, int endS2)` Computes and returns the alignment of `s1` and `s2` (`Alignment.Alignment(AlignmentType, Costs)`).
`PairwiseStringAlignment` | `Alignment.getAlignment(Sequence s1, Sequence s2)` Computes and returns the alignment of `s1` and `s2` (`Alignment.Alignment(AlignmentType, Costs)`).

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