Uses of Class
de.jstacs.data.DinucleotideProperty

Packages that use DinucleotideProperty

de.jstacs.data

Provides classes for the representation of data.

Uses of DinucleotideProperty in de.jstacs.data

Methods in de.jstacs.data that return DinucleotideProperty

static DinucleotideProperty[]	DinucleotideProperty.filterProperties(String nucleicAcid, Boolean doubleStrand, DinucleotideProperty.HowCreated howCreated, DinucleotideProperty.Type type, String dimension) Filters all DinucleotidePropertys by some of their annotations.
static DinucleotideProperty	DinucleotideProperty.valueOf(String name) Returns the enum constant of this type with the specified name.
static DinucleotideProperty[]	DinucleotideProperty.values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods in de.jstacs.data with parameters of type DinucleotideProperty

static ImageResult	DinucleotideProperty.getPropertyImage(Sample original, DinucleotideProperty prop, DinucleotideProperty.Smoothing smoothing, REnvironment re, int xLeft, String pltOptions, int width, int height)
static ImageResult	DinucleotideProperty.getPropertyImage(Sequence original, DinucleotideProperty prop, DinucleotideProperty.Smoothing smoothing, REnvironment re, int xLeft, String pltOptions, int width, int height)
static Sample	DinucleotideProperty.getSampleForProperty(Sample original, DinucleotideProperty... properties) Creates a new Sample by converting each Sequence in original to the DinucleotidePropertys properties and setting these as ReferenceSequenceAnnotation of each original sequence.
static Sample	DinucleotideProperty.getSampleForProperty(Sample original, DinucleotideProperty.Smoothing smoothing, boolean addToAnnotation, DinucleotideProperty... properties) Creates a new Sample by converting each Sequence in original to the DinucleotidePropertys properties and adding or setting these as ReferenceSequenceAnnotation of each original sequence.
static Sample	DinucleotideProperty.getSampleForProperty(Sample original, DinucleotideProperty.Smoothing smoothing, boolean originalAsAnnotation, DinucleotideProperty property) Creates a new Sample by converting each Sequence in original to the DinucleotideProperty property using the DinucleotideProperty.Smoothing smoothing.
static Sample	DinucleotideProperty.getSampleForProperty(Sample original, DinucleotideProperty property) Creates a new Sample by converting each Sequence in original to the DinucleotideProperty property.