Uses of Class
de.jstacs.data.sequences.DiscreteSequence

Packages that use DiscreteSequence

de.jstacs.data.sequences

Provides classes for representing sequences.

Uses of DiscreteSequence in de.jstacs.data.sequences

Subclasses of DiscreteSequence in de.jstacs.data.sequences

class	ByteSequence This class is for sequences with the alphabet symbols encoded as bytes and can therefore be used for discrete AlphabetContainers with alphabets that use only few symbols.
class	IntSequence This class is for sequences with the alphabet symbols encoded as ints and can therefore be used for discrete AlphabetContainers with alphabets that use a huge number of symbols.
class	MappedDiscreteSequence This class allows to map a discrete Sequence to an new Sequence using some DiscreteAlphabetMappings.
class	MultiDimensionalDiscreteSequence This class is for multidimensional sequences that can be used, for instance, for phylogenetic footprinting.
class	ShortSequence This class is for sequences with the alphabet symbols encoded as shortss and can therefore be used for discrete AlphabetContainers with alphabets that use many different symbols.
class	SimpleDiscreteSequence This is the main class for any discrete sequence.
class	SparseSequence This class is an implementation for sequences on one alphabet with length 4.