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java.lang.Object java.lang.Enum<MutableMotifDiscovererToolbox.InitMethodForScoringFunction> de.jstacs.motifDiscovery.MutableMotifDiscovererToolbox.InitMethodForScoringFunction
public static enum MutableMotifDiscovererToolbox.InitMethodForScoringFunction
This enum defines some constants for the method MutableMotifDiscovererToolbox.getSortedInitialParameters(ScoringFunction[], InitMethodForScoringFunction[], SFBasedOptimizableFunction, int, OutputStream, int)
.
These constants define how to initialize the ScoringFunction
s.
Enum Constant Summary | |
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MOTIF_RANDOMLY
This constants indicates that the motifs of a MutableMotifDiscoverer should be initialized using MutableMotifDiscoverer.initializeMotifRandomly(int) . |
|
NOTHING
This constants indicates that a ScoringFunction should not be initialized, i.e. the instance is not changed and uses the current parameters. |
|
PLUG_IN
This constants indicates that a ScoringFunction should be initialized using ScoringFunction.initializeFunction(int, boolean, Sample[], double[][]) . |
|
RANDOMLY
This constants indicates that a ScoringFunction should be initialized using ScoringFunction.initializeFunctionRandomly(boolean) . |
Method Summary | |
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static MutableMotifDiscovererToolbox.InitMethodForScoringFunction |
valueOf(String name)
Returns the enum constant of this type with the specified name. |
static MutableMotifDiscovererToolbox.InitMethodForScoringFunction[] |
values()
Returns an array containing the constants of this enum type, in the order they are declared. |
Methods inherited from class java.lang.Enum |
---|
clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf |
Methods inherited from class java.lang.Object |
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getClass, notify, notifyAll, wait, wait, wait |
Enum Constant Detail |
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public static final MutableMotifDiscovererToolbox.InitMethodForScoringFunction PLUG_IN
ScoringFunction
should be initialized using ScoringFunction.initializeFunction(int, boolean, Sample[], double[][])
.
public static final MutableMotifDiscovererToolbox.InitMethodForScoringFunction MOTIF_RANDOMLY
MutableMotifDiscoverer
should be initialized using MutableMotifDiscoverer.initializeMotifRandomly(int)
.
public static final MutableMotifDiscovererToolbox.InitMethodForScoringFunction RANDOMLY
ScoringFunction
should be initialized using ScoringFunction.initializeFunctionRandomly(boolean)
.
public static final MutableMotifDiscovererToolbox.InitMethodForScoringFunction NOTHING
ScoringFunction
should not be initialized, i.e. the instance is not changed and uses the current parameters.
Method Detail |
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public static MutableMotifDiscovererToolbox.InitMethodForScoringFunction[] values()
for (MutableMotifDiscovererToolbox.InitMethodForScoringFunction c : MutableMotifDiscovererToolbox.InitMethodForScoringFunction.values()) System.out.println(c);
public static MutableMotifDiscovererToolbox.InitMethodForScoringFunction valueOf(String name)
name
- the name of the enum constant to be returned.
IllegalArgumentException
- if this enum type has no constant
with the specified name
NullPointerException
- if the argument is null
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