de.jstacs.scoringFunctions.directedGraphicalModels.structureLearning.measures
Class InhomogeneousMarkov.InhomogeneousMarkovParameterSet

java.lang.Object
  extended by de.jstacs.parameters.ParameterSet
      extended by de.jstacs.parameters.InstanceParameterSet
          extended by de.jstacs.scoringFunctions.directedGraphicalModels.structureLearning.measures.InhomogeneousMarkov.InhomogeneousMarkovParameterSet
All Implemented Interfaces:
GalaxyConvertible, RangeIterator, Storable, Cloneable
Enclosing class:
InhomogeneousMarkov

public static class InhomogeneousMarkov.InhomogeneousMarkovParameterSet
extends InstanceParameterSet

Class for an InstanceParameterSet that defines the parameters of an InhomogeneousMarkov structure Measure.

Author:
Jan Grau

Nested Class Summary
 
Nested classes/interfaces inherited from class de.jstacs.parameters.ParameterSet
ParameterSet.ParameterList
 
Field Summary
 
Fields inherited from class de.jstacs.parameters.ParameterSet
errorMessage, parameters, parent, ranged
 
Constructor Summary
InhomogeneousMarkov.InhomogeneousMarkovParameterSet()
          Creates a new InhomogeneousMarkov.InhomogeneousMarkovParameterSet with empty parameter values.
InhomogeneousMarkov.InhomogeneousMarkovParameterSet(int order)
          Creates a new InhomogeneousMarkov.InhomogeneousMarkovParameterSet with the parameter for the order set to order.
InhomogeneousMarkov.InhomogeneousMarkovParameterSet(StringBuffer representation)
          Creates a new InhomogeneousMarkov.InhomogeneousMarkovParameterSet from its XML representation as defined by the Storable interface.
 
Method Summary
 String getInstanceComment()
          Returns a comment (a textual description) of the class that can be constructed using this ParameterSet.
 String getInstanceName()
          Returns the name of an instance of the class that can be constructed using this ParameterSet.
 int getOrder()
          Returns the order of the InhomogeneousMarkov structure measure as defined by this set of parameters.
protected  void loadParameters()
          Loads the parameters for this ParameterSet.
 
Methods inherited from class de.jstacs.parameters.InstanceParameterSet
fromXML, getInstance, getInstanceClass, toXML
 
Methods inherited from class de.jstacs.parameters.ParameterSet
clone, fromGalaxy, getErrorMessage, getId, getIndex, getNumberOfParameters, getNumberOfValues, getParameterAt, getParent, hasDefaultOrIsSet, initParameterList, initParameterList, isAtomic, isRanged, makeRanged, next, parametersLoaded, propagateId, recieveId, replaceParametersWithRangedInstance, reset, resetToFirst, setParent, simplify, toGalaxy, valuesToString
 
Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

InhomogeneousMarkov.InhomogeneousMarkovParameterSet

public InhomogeneousMarkov.InhomogeneousMarkovParameterSet()
Creates a new InhomogeneousMarkov.InhomogeneousMarkovParameterSet with empty parameter values.


InhomogeneousMarkov.InhomogeneousMarkovParameterSet

public InhomogeneousMarkov.InhomogeneousMarkovParameterSet(int order)
                                                    throws Exception
Creates a new InhomogeneousMarkov.InhomogeneousMarkovParameterSet with the parameter for the order set to order.

Parameters:
order - the order
Throws:
Exception - if the parameters could not be created or set

InhomogeneousMarkov.InhomogeneousMarkovParameterSet

public InhomogeneousMarkov.InhomogeneousMarkovParameterSet(StringBuffer representation)
                                                    throws NonParsableException
Creates a new InhomogeneousMarkov.InhomogeneousMarkovParameterSet from its XML representation as defined by the Storable interface.

Parameters:
representation - the XML code as StringBuffer
Throws:
NonParsableException - if the XML representation could not be parsed
Method Detail

getInstanceComment

public String getInstanceComment()
Description copied from class: InstanceParameterSet
Returns a comment (a textual description) of the class that can be constructed using this ParameterSet.

Specified by:
getInstanceComment in class InstanceParameterSet
Returns:
the comment of the class

getInstanceName

public String getInstanceName()
Description copied from class: InstanceParameterSet
Returns the name of an instance of the class that can be constructed using this ParameterSet.

Specified by:
getInstanceName in class InstanceParameterSet
Returns:
the name of the class

getOrder

public int getOrder()
Returns the order of the InhomogeneousMarkov structure measure as defined by this set of parameters.

Returns:
the order

loadParameters

protected void loadParameters()
                       throws Exception
Description copied from class: ParameterSet
Loads the parameters for this ParameterSet. This is in most cases done by calling ParameterSet.initParameterList() or ParameterSet.initParameterList(int) to initialize ParameterSet.parameters and afterwards filling ParameterSet.parameters with instances of subclasses of Parameter.

Specified by:
loadParameters in class ParameterSet
Throws:
Exception - if the parameters could not be loaded
See Also:
Parameter, ParameterSet.parameters, ParameterSet.initParameterList(), ParameterSet.initParameterList(int)