Uses of Class
de.jstacs.AnnotatedEntity

Packages that use AnnotatedEntity
de.jstacs This package is the root package for the most and important packages. 
de.jstacs.classifiers This package provides the framework for any classifier. 
de.jstacs.parameters This package provides classes for parameters that establish a general convention for the description of parameters as defined in the Parameter-interface. 
de.jstacs.results This package provides classes for results and sets of results. 
de.jstacs.utils.galaxy   
 

Uses of AnnotatedEntity in de.jstacs
 

Classes in de.jstacs with type parameters of type AnnotatedEntity
 class AnnotatedEntityList<T extends AnnotatedEntity>
          Class for a list of AnnotatedEntitys where elements can be accessed either by index or by the name of the AnnotatedEntity.
 

Methods in de.jstacs that return AnnotatedEntity
<E extends T>
E[]
AnnotatedEntityList.toArray(E[] ar)
          Returns the AnnotatedEntitys in this list as an array.
 

Methods in de.jstacs with parameters of type AnnotatedEntity
 void AnnotatedEntityList.add(T... entities)
          Adds all AnnotatedEntitys in entities to the list.
<E extends T>
E[]
AnnotatedEntityList.toArray(E[] ar)
          Returns the AnnotatedEntitys in this list as an array.
 

Uses of AnnotatedEntity in de.jstacs.classifiers
 

Subclasses of AnnotatedEntity in de.jstacs.classifiers
static class AbstractScoreBasedClassifier.DoubleTableResult
          This class is for Results given as a table of double s.
 

Uses of AnnotatedEntity in de.jstacs.parameters
 

Subclasses of AnnotatedEntity in de.jstacs.parameters
 class AbstractSelectionParameter
          Class for a collection parameter, i.e. a parameter that provides some collection of possible values the user can choose from.
 class EnumParameter
          This class implements a SelectionParameter based on an Enum.
 class FileParameter
          Class for a Parameter that represents a local file.
 class MultiSelectionParameter
          Class for a Parameter that provides a collection of possible values.
 class Parameter
          Abstract class for a parameter that shall be used as the parameter of some method, constructor, etc.
 class ParameterSetContainer
          Class for a ParameterSetContainer that contains a ParameterSet as value.
 class RangeParameter
          Class for a parameter wrapper that allows SimpleParameters to be set to a set of values.
 class SelectionParameter
          Class for a collection parameter, i.e. a parameter that provides some collection of possible values the user can choose from.
 class SimpleParameter
          Class for a "simple" parameter.
 

Uses of AnnotatedEntity in de.jstacs.results
 

Subclasses of AnnotatedEntity in de.jstacs.results
 class CategoricalResult
          A class for categorical results (i.e. non-numerical results) for primitives and Strings.
 class DataSetResult
          Result that contains a DataSet.
 class ImageResult
          A class for results that are images of the PNG format.
 class ListResult
          Class for a Result that contains a list or a matrix, respectively, of ResultSets.
 class NumericalResult
          Class for numerical Result values.
 class Result
          The abstract class for any result.
 class SimpleResult
          Abstract class for a Result with a value of a primitive data type or String.
 class StorableResult
          Class for Results that are Storables.
 

Uses of AnnotatedEntity in de.jstacs.utils.galaxy
 

Subclasses of AnnotatedEntity in de.jstacs.utils.galaxy
static class GalaxyAdaptor.FileResult
          Result for files that are results of some computation.
static class GalaxyAdaptor.LinkedImageResult
          Class for an ImageResult that is linked to a file that can be downloaded.