| Package | Description |
|---|---|
| de.jstacs.classifiers.differentiableSequenceScoreBased |
Provides the classes for
Classifiers that are based on SequenceScores.It includes a sub-package for discriminative objective functions, namely conditional likelihood and supervised posterior, and a separate sub-package for the parameter priors, that can be used for the supervised posterior. |
| de.jstacs.motifDiscovery |
This package provides the framework including the interface for any de novo motif discoverer.
|
| de.jstacs.motifDiscovery.history |
| Class and Description |
|---|
| History
This interface is used to manage the history of some process.
|
| Class and Description |
|---|
| History
This interface is used to manage the history of some process.
|
| Class and Description |
|---|
| CappedHistory
This class combines a threshold on the number of steps which can be performed with any other
History. |
| History
This interface is used to manage the history of some process.
|
| NoRevertHistory
This class implements a history that allows operations, that are not a
priorily forbidden and do not create a configuration that has already be
considered.
|
| RestrictedRepeatHistory
This class implements a history that allows operations (i.e.
|
| SimpleHistory
This class implements a simple history that has a limited memory that will be
used cyclicly.
|