| Package | Description |
|---|---|
| de.jstacs.classifiers |
This package provides the framework for any classifier.
|
| de.jstacs.classifiers.differentiableSequenceScoreBased |
Provides the classes for
Classifiers that are based on SequenceScores.It includes a sub-package for discriminative objective functions, namely conditional likelihood and supervised posterior, and a separate sub-package for the parameter priors, that can be used for the supervised posterior. |
| de.jstacs.classifiers.differentiableSequenceScoreBased.sampling |
Provides the classes for
AbstractScoreBasedClassifiers that are based on
SamplingDifferentiableStatisticalModels
and that sample parameters using the Metropolis-Hastings algorithm. |
| de.jstacs.classifiers.trainSMBased |
Provides the classes for
Classifiers that are based on TrainableStatisticalModels. |
| de.jstacs.sequenceScores.statisticalModels.trainable.discrete.inhomogeneous.shared | |
| de.jstacs.tools.ui.galaxy |
| Modifier and Type | Method and Description |
|---|---|
CategoricalResult[] |
MappingClassifier.getClassifierAnnotation() |
abstract CategoricalResult[] |
AbstractClassifier.getClassifierAnnotation()
Returns an array of
Results of dimension
AbstractClassifier.getNumberOfClasses() that contains information about the
classifier and for each class.
res[0] = new CategoricalResult( "classifier", "the kind of classifier", getInstanceName() ); |
| Modifier and Type | Method and Description |
|---|---|
CategoricalResult[] |
ScoreClassifier.getClassifierAnnotation() |
| Modifier and Type | Method and Description |
|---|---|
CategoricalResult[] |
SamplingScoreBasedClassifier.getClassifierAnnotation() |
| Modifier and Type | Method and Description |
|---|---|
CategoricalResult[] |
TrainSMBasedClassifier.getClassifierAnnotation() |
| Modifier and Type | Method and Description |
|---|---|
CategoricalResult[] |
SharedStructureClassifier.getClassifierAnnotation() |
| Modifier and Type | Class and Description |
|---|---|
static class |
GalaxyAdaptor.HeadResult
Class for a result that is basically a
CategoricalResult,
but has its own name for checking purposes. |