de.jstacs.sampling

Class VarianceRatioBurnInTestParameterSet

java.lang.Object

de.jstacs.parameters.ParameterSet

de.jstacs.parameters.InstanceParameterSet<AbstractBurnInTest>

de.jstacs.sampling.AbstractBurnInTestParameterSet

de.jstacs.sampling.VarianceRatioBurnInTestParameterSet

All Implemented Interfaces:

GalaxyConvertible, Storable, Cloneable

public class VarianceRatioBurnInTestParameterSet
extends AbstractBurnInTestParameterSet

Class for the parameters of a VarianceRatioBurnInTest. This class fulfills the requirements of a AbstractBurnInTestParameterSet and can be used to create a new VarianceRatioBurnInTest.

Author:

Jens Keilwagen

Nested Class Summary

Nested classes/interfaces inherited from class de.jstacs.parameters.ParameterSet

ParameterSet.ParameterList

Field Summary

Fields inherited from class de.jstacs.parameters.ParameterSet

errorMessage, parameters, parent

Constructor Summary

Constructors

Constructor and Description
VarianceRatioBurnInTestParameterSet() Creates a new VarianceRatioBurnInTestParameterSet with empty parameter values.
VarianceRatioBurnInTestParameterSet(int starts, double t) Creates a new VarianceRatioBurnInTestParameterSet with pre-defined parameter values.
VarianceRatioBurnInTestParameterSet(StringBuffer representation) The standard constructor for the interface Storable.

Method Summary

Methods

Modifier and Type	Method and Description
String	getInstanceComment() Returns a comment (a textual description) of the class that can be constructed using this ParameterSet.
String	getInstanceName() Returns the name of an instance of the class that can be constructed using this ParameterSet.
double	getThreshold() Returns the threshold used in the VarianceRatioBurnInTestParameterSet.

Methods inherited from class de.jstacs.sampling.AbstractBurnInTestParameterSet

clone, getNumberOfStarts

Methods inherited from class de.jstacs.parameters.InstanceParameterSet

fromXML, getInstance, getInstanceClass, toXML

Methods inherited from class de.jstacs.parameters.ParameterSet

fromGalaxy, getAllParameterNames, getComment, getComment, getErrorMessage, getIndex, getName, getName, getNumberOfParameters, getParameterAt, getParameterForName, getParent, hasDefaultOrIsSet, initParameterList, initParameterList, isAtomic, isComparable, parametersLoaded, reset, setParent, toGalaxy

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

VarianceRatioBurnInTestParameterSet

public VarianceRatioBurnInTestParameterSet()
                                    throws IllegalArgumentException

Creates a new VarianceRatioBurnInTestParameterSet with empty parameter values.

Throws:

IllegalArgumentException - if instanceClass is null

VarianceRatioBurnInTestParameterSet

public VarianceRatioBurnInTestParameterSet(int starts,
                                   double t)
                                    throws IllegalArgumentException,
                                           SimpleParameter.IllegalValueException

Creates a new VarianceRatioBurnInTestParameterSet with pre-defined parameter values.

Parameters:

starts - the number of runs the Gibbs Sampler will be started

t - the threshold for determining the end of the burn-in phase

Throws:

IllegalArgumentException - if instanceClass is null

SimpleParameter.IllegalValueException - if t can not be set

VarianceRatioBurnInTestParameterSet

public VarianceRatioBurnInTestParameterSet(StringBuffer representation)
                                    throws NonParsableException

The standard constructor for the interface Storable. Constructs an VarianceRatioBurnInTestParameterSet out of an XML representation.

Parameters:

representation - the XML representation as StringBuffer

Throws:

NonParsableException - if the VarianceRatioBurnInTestParameterSet could not be reconstructed out of the StringBuffer representation

Method Detail

getThreshold

public double getThreshold()

Returns the threshold used in the VarianceRatioBurnInTestParameterSet.

Returns:

the threshold used in the VarianceRatioBurnInTestParameterSet

getInstanceComment

public String getInstanceComment()

Description copied from class: InstanceParameterSet

Returns a comment (a textual description) of the class that can be constructed using this ParameterSet.

Specified by:

getInstanceComment in class InstanceParameterSet<AbstractBurnInTest>

Returns:

the comment of the class

getInstanceName

public String getInstanceName()

Description copied from class: InstanceParameterSet

Returns the name of an instance of the class that can be constructed using this ParameterSet.

Specified by:

getInstanceName in class InstanceParameterSet<AbstractBurnInTest>

Returns:

the name of the class