Uses of Package
de.jstacs.sequenceScores.statisticalModels.trainable.hmm

Packages that use de.jstacs.sequenceScores.statisticalModels.trainable.hmm

Package	Description
de.jstacs.sequenceScores.statisticalModels.trainable.hmm	The package provides all interfaces and classes for a hidden Markov model (HMM).
de.jstacs.sequenceScores.statisticalModels.trainable.hmm.models	The package provides different implementations of hidden Markov models based on AbstractHMM.

Classes in de.jstacs.sequenceScores.statisticalModels.trainable.hmm used by de.jstacs.sequenceScores.statisticalModels.trainable.hmm

Class and Description
AbstractHMM This class is the super class of all implementations hidden Markov models (HMMs) in Jstacs.
HMMFactory.HMMType This enum defines some standard architecture of profile HMMs.
HMMFactory.PseudoTransitionElement This class is used as place holder for a later BasicHigherOrderTransition.AbstractTransitionElement.

Classes in de.jstacs.sequenceScores.statisticalModels.trainable.hmm used by de.jstacs.sequenceScores.statisticalModels.trainable.hmm.models

Class and Description
AbstractHMM This class is the super class of all implementations hidden Markov models (HMMs) in Jstacs.