de.jstacs.tools.ui.galaxy

Class GalaxyAdaptor.LineBasedResult

java.lang.Object

de.jstacs.AnnotatedEntity

de.jstacs.results.Result

de.jstacs.tools.ui.galaxy.GalaxyAdaptor.LineBasedResult

All Implemented Interfaces:

Storable

Enclosing class:

GalaxyAdaptor

public abstract static class GalaxyAdaptor.LineBasedResult
extends Result

Superclass for all Result that may be saved line by line.

Author:

Jan Grau

Field Summary

Fields inherited from class de.jstacs.AnnotatedEntity

comment, datatype, name

Constructor Summary

Constructors

Modifier	Constructor and Description
protected	GalaxyAdaptor.LineBasedResult(String name, String comment, DataType datatype) Creates a new GalaxyAdaptor.LineBasedResult with given name, comment, and data type.

Method Summary

Methods

Modifier and Type	Method and Description
abstract String	getNextLine(boolean forExport) Returns the next line of the result
abstract void	reset() Resets the line counter to the beginning

Methods inherited from class de.jstacs.results.Result

checkDatatype, createResult, isCastableResult, isComparableResult

Methods inherited from class de.jstacs.AnnotatedEntity

appendFurtherInfos, extractFurtherInfos, getComment, getDatatype, getName, getValue, getXMLTag, toXML

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GalaxyAdaptor.LineBasedResult

protected GalaxyAdaptor.LineBasedResult(String name,
                             String comment,
                             DataType datatype)

Creates a new GalaxyAdaptor.LineBasedResult with given name, comment, and data type.

Parameters:

name - the name

comment - the comment

datatype - the data type

Method Detail

reset

public abstract void reset()

Resets the line counter to the beginning

getNextLine

public abstract String getNextLine(boolean forExport)

Returns the next line of the result

Parameters:

forExport - if this line is acquired for export

Returns:

the line as String