public static enum MutableMotifDiscovererToolbox.InitMethodForDiffSM extends Enum<MutableMotifDiscovererToolbox.InitMethodForDiffSM>
MutableMotifDiscovererToolbox.getSortedInitialParameters(DifferentiableSequenceScore[], InitMethodForDiffSM[], DiffSSBasedOptimizableFunction, int, OutputStream, int)
.
These constants define how to initialize the DifferentiableSequenceScore
s.Enum Constant and Description |
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MOTIF_RANDOMLY
This constants indicates that the motifs of a
MutableMotifDiscoverer should be initialized using MutableMotifDiscoverer.initializeMotifRandomly(int) . |
NOTHING
This constants indicates that a
DifferentiableSequenceScore should not be initialized, i.e. |
PLUG_IN
This constants indicates that a
DifferentiableSequenceScore should be initialized using DifferentiableSequenceScore.initializeFunction(int, boolean, DataSet[], double[][]) . |
RANDOMLY
This constants indicates that a
DifferentiableSequenceScore should be initialized using DifferentiableSequenceScore.initializeFunctionRandomly(boolean) . |
Modifier and Type | Method and Description |
---|---|
static MutableMotifDiscovererToolbox.InitMethodForDiffSM |
valueOf(String name)
Returns the enum constant of this type with the specified name.
|
static MutableMotifDiscovererToolbox.InitMethodForDiffSM[] |
values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
public static final MutableMotifDiscovererToolbox.InitMethodForDiffSM PLUG_IN
DifferentiableSequenceScore
should be initialized using DifferentiableSequenceScore.initializeFunction(int, boolean, DataSet[], double[][])
.public static final MutableMotifDiscovererToolbox.InitMethodForDiffSM MOTIF_RANDOMLY
MutableMotifDiscoverer
should be initialized using MutableMotifDiscoverer.initializeMotifRandomly(int)
.public static final MutableMotifDiscovererToolbox.InitMethodForDiffSM RANDOMLY
DifferentiableSequenceScore
should be initialized using DifferentiableSequenceScore.initializeFunctionRandomly(boolean)
.public static final MutableMotifDiscovererToolbox.InitMethodForDiffSM NOTHING
DifferentiableSequenceScore
should not be initialized, i.e. the instance is not changed and uses the current parameters.public static MutableMotifDiscovererToolbox.InitMethodForDiffSM[] values()
for (MutableMotifDiscovererToolbox.InitMethodForDiffSM c : MutableMotifDiscovererToolbox.InitMethodForDiffSM.values()) System.out.println(c);
public static MutableMotifDiscovererToolbox.InitMethodForDiffSM valueOf(String name)
name
- the name of the enum constant to be returned.IllegalArgumentException
- if this enum type has no constant with the specified nameNullPointerException
- if the argument is null