| Package | Description |
|---|---|
| de.jstacs.sequenceScores.statisticalModels.trainable.hmm |
The package provides all interfaces and classes for a hidden Markov model (HMM).
|
| de.jstacs.sequenceScores.statisticalModels.trainable.hmm.models |
The package provides different implementations of hidden Markov models based on
AbstractHMM. |
| de.jstacs.sequenceScores.statisticalModels.trainable.hmm.states |
The package provides all interfaces and classes for states used in hidden Markov models.
|
| de.jstacs.sequenceScores.statisticalModels.trainable.hmm.states.emissions | |
| de.jstacs.sequenceScores.statisticalModels.trainable.hmm.states.emissions.continuous | |
| de.jstacs.sequenceScores.statisticalModels.trainable.hmm.states.emissions.discrete |
| Class and Description |
|---|
| Emission
This interface declares all method for an emission of a state.
|
| Class and Description |
|---|
| DifferentiableEmission
This interface declares all methods needed in an emission during a numerical optimization of HMM.
|
| Emission
This interface declares all method for an emission of a state.
|
| SamplingEmission |
| Class and Description |
|---|
| DifferentiableEmission
This interface declares all methods needed in an emission during a numerical optimization of HMM.
|
| Emission
This interface declares all method for an emission of a state.
|
| SamplingEmission |
| Class and Description |
|---|
| DifferentiableEmission
This interface declares all methods needed in an emission during a numerical optimization of HMM.
|
| Emission
This interface declares all method for an emission of a state.
|
| MixtureEmission
This class implements a mixture of
Emissions. |
| SamplingEmission |
| SilentEmission
This class implements a silent emission which is used to create silent states.
|
| UniformEmission
This class implements a simple uniform emission.
|
| Class and Description |
|---|
| DifferentiableEmission
This interface declares all methods needed in an emission during a numerical optimization of HMM.
|
| Emission
This interface declares all method for an emission of a state.
|
| Class and Description |
|---|
| DifferentiableEmission
This interface declares all methods needed in an emission during a numerical optimization of HMM.
|
| Emission
This interface declares all method for an emission of a state.
|
| SamplingEmission |