Uses of Class
de.jstacs.sequenceScores.statisticalModels.trainable.phylo.PhyloNode

Packages that use PhyloNode

Package	Description
de.jstacs.sequenceScores.statisticalModels.trainable.phylo

Uses of PhyloNode in de.jstacs.sequenceScores.statisticalModels.trainable.phylo

Methods in de.jstacs.sequenceScores.statisticalModels.trainable.phylo that return PhyloNode

Modifier and Type	Method and Description
PhyloNode	PhyloNode.clone()
PhyloNode	PhyloTree.getRoot() This method returns the root node of the tree

Methods in de.jstacs.sequenceScores.statisticalModels.trainable.phylo that return types with arguments of type PhyloNode

Modifier and Type	Method and Description
ArrayList<PhyloNode>	PhyloTree.getAllLeafs() This method returns a list of PhyloNodes that represent the leafs of the tree
ArrayList<PhyloNode>	PhyloNode.getAllLeafs() This method returns a list of PhyloNodes that are leafs in the subtree starting from this instance
ArrayList<PhyloNode>	PhyloNode.getChildrenNodes() This method returns a list of PhyloNodes that are children of this instance

Methods in de.jstacs.sequenceScores.statisticalModels.trainable.phylo with parameters of type PhyloNode

Modifier and Type	Method and Description
void	PhyloNode.addChild(PhyloNode node) This method adds a children node to the current instance

Constructors in de.jstacs.sequenceScores.statisticalModels.trainable.phylo with parameters of type PhyloNode

Constructor and Description
PhyloTree(String name, PhyloNode root) Construct an instance of the class PhyloTree