de.jstacs.sequenceScores.statisticalModels.differentiable.mixture

Enum StrandDiffSM.InitMethod

java.lang.Object

java.lang.Enum<StrandDiffSM.InitMethod>

de.jstacs.sequenceScores.statisticalModels.differentiable.mixture.StrandDiffSM.InitMethod

All Implemented Interfaces:

Serializable, Comparable<StrandDiffSM.InitMethod>

Enclosing class:

StrandDiffSM

public static enum StrandDiffSM.InitMethod
extends Enum<StrandDiffSM.InitMethod>

This enum defines the different types of plug-in initialization of a StrandDiffSM.

Author:

Jens Keilwagen

Enum Constant Summary

Enum Constants

Enum Constant and Description
INIT_BACKWARD_STRAND This value indicates that the model is initialized with the data on the backward strand.
INIT_BOTH_STRANDS This value indicates that the model is initialized with the data, where the weight for both strand of each sequence is chosen randomly.
INIT_FORWARD_STRAND This value indicates that the model is initialized with the data on the forward strand.

Method Summary

Modifier and Type	Method and Description
static StrandDiffSM.InitMethod	valueOf(String name) Returns the enum constant of this type with the specified name.
static StrandDiffSM.InitMethod[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

INIT_FORWARD_STRAND

public static final StrandDiffSM.InitMethod INIT_FORWARD_STRAND

This value indicates that the model is initialized with the data on the forward strand.

INIT_BACKWARD_STRAND

public static final StrandDiffSM.InitMethod INIT_BACKWARD_STRAND

This value indicates that the model is initialized with the data on the backward strand.

INIT_BOTH_STRANDS

public static final StrandDiffSM.InitMethod INIT_BOTH_STRANDS

This value indicates that the model is initialized with the data, where the weight for both strand of each sequence is chosen randomly.

Method Detail

values

public static StrandDiffSM.InitMethod[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (StrandDiffSM.InitMethod c : StrandDiffSM.InitMethod.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static StrandDiffSM.InitMethod valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null