See: Description
Class  Description 

BayesianNetworkTrainSM 
The class implements a Bayesian network (
StructureLearner.ModelType.BN ) of fixed order. 
CombinationIterator 
This class can be used for iterating over all possible combinations (in the
sense of combinatorics).

DAGTrainSM 
The abstract class for directed acyclic graphical models
(
DAGTrainSM ). 
FSDAGModelForGibbsSampling 
This is the class for a fixed structure directed acyclic graphical model (see
FSDAGTrainSM ) that can be used in a Gibbs sampling. 
FSDAGTrainSM 
This class can be used for any discrete fixed structure
directed acyclic graphical model (
FSDAGTrainSM ). 
FSMEManager 
This class can be used for any discrete fixed structure maximum entropy model (FSMEM).

InhCondProb 
This class handles (conditional) probabilities of sequences for
inhomogeneous models.

InhConstraint 
This class is the superclass for all inhomogeneous constraints.

InhomogeneousDGTrainSM 
This class is the main class for all inhomogeneous discrete
graphical models (
InhomogeneousDGTrainSM ). 
MEM 
This class represents a maximum entropy model.

MEManager 
This class is the super class for all maximum entropy models

MEMConstraint 
This constraint can be used for any maximum entropy
model (MEM) application.

MEMTools  
MEMTools.DualFunction 
The dual function to the constraint problem of learning MEM's.

SequenceIterator 
This class is used to iterate over a discrete sequence.

StructureLearner 
This class can be used to learn the structure of any discrete model.

TwoPointEvaluater 
This class is for visualizing two point dependency between sequence
positions.

Enum  Description 

StructureLearner.LearningType 
This
enum defines the different types of learning that are
possible with the StructureLearner . 
StructureLearner.ModelType 
This
enum defines the different types of models that can be
learned with the StructureLearner . 
BayesianNetworkTrainSM
, which is either an inhomogeneous Markov model, a permuted Markov model or a Bayesian network
FSDAGTrainSM
, which is a model on a fixed structure of a directed acyclic graph