Uses of Class
de.jstacs.sequenceScores.statisticalModels.trainable.hmm.models.HigherOrderHMM

Packages that use HigherOrderHMM

Package	Description
de.jstacs.sequenceScores.statisticalModels.trainable.hmm.models	The package provides different implementations of hidden Markov models based on AbstractHMM.

Uses of HigherOrderHMM in de.jstacs.sequenceScores.statisticalModels.trainable.hmm.models

Subclasses of HigherOrderHMM in de.jstacs.sequenceScores.statisticalModels.trainable.hmm.models

Modifier and Type	Class and Description
class	DifferentiableHigherOrderHMM This class combines an HigherOrderHMM and a DifferentiableStatisticalModel by implementing some of the declared methods.
class	SamplingHigherOrderHMM
class	SamplingPhyloHMM This class implements an (higher order) HMM that contains multi-dimensional emissions described by a phylogenetic tree.

Methods in de.jstacs.sequenceScores.statisticalModels.trainable.hmm.models that return HigherOrderHMM

Modifier and Type	Method and Description
HigherOrderHMM	HigherOrderHMM.clone()