Uses of Class
de.jstacs.scoringFunctions.AbstractVariableLengthScoringFunction

Packages that use AbstractVariableLengthScoringFunction

de.jstacs.scoringFunctions	Provides ScoringFunctions that can be used in a ScoreClassifier.
de.jstacs.scoringFunctions.homogeneous	Provides ScoringFunctions that are homogeneous, i.e. model probabilities or scores independent of the position within a sequence

Uses of AbstractVariableLengthScoringFunction in de.jstacs.scoringFunctions

Subclasses of AbstractVariableLengthScoringFunction in de.jstacs.scoringFunctions

class

CMMScoringFunction This scoring function implements a cyclic Markov model of arbitrary order and periodicity for any sequence length.

Uses of AbstractVariableLengthScoringFunction in de.jstacs.scoringFunctions.homogeneous

Subclasses of AbstractVariableLengthScoringFunction in de.jstacs.scoringFunctions.homogeneous

class	HMM0ScoringFunction This scoring function implements a homogeneous Markov model of order zero (hMM(0)) for a fixed sequence length.
class	HMMScoringFunction This scoring function implements a homogeneous Markov model of arbitrary order for any sequence length.
class	HomogeneousScoringFunction This is the main class for all homogeneous ScoringFunctions.
class	UniformHomogeneousScoringFunction This scoring function does nothing.