Hierarchy For Package de.jstacs.data

Package Hierarchies:

All Packages

Class Hierarchy

• java.lang.Object
  • de.jstacs.data.AlphabetContainer (implements java.lang.Comparable<T>, de.jstacs.InstantiableFromParameterSet, de.jstacs.Storable)
  • de.jstacs.data.DataSet (implements java.lang.Iterable<T>)
    • de.jstacs.data.DNADataSet
  • de.jstacs.data.DataSet.ElementEnumerator (implements java.util.Iterator<E>, de.jstacs.data.RecyclableSequenceEnumerator)
  • de.jstacs.data.DataSet.WeightedDataSetFactory
  • de.jstacs.data.DataSetKMerEnumerator (implements de.jstacs.data.RecyclableSequenceEnumerator)
  • de.jstacs.data.DinucleotideProperty.Smoothing
    • de.jstacs.data.DinucleotideProperty.MeanSmoothing
    • de.jstacs.data.DinucleotideProperty.MedianSmoothing
    • de.jstacs.data.DinucleotideProperty.NoSmoothing
  • de.jstacs.data.DiscreteSequenceEnumerator (implements de.jstacs.data.RecyclableSequenceEnumerator)
  • de.jstacs.parameters.ParameterSet (implements java.lang.Cloneable, de.jstacs.parameters.GalaxyConvertible, de.jstacs.Storable)
    • de.jstacs.parameters.ExpandableParameterSet
      • de.jstacs.data.AlphabetContainerParameterSet.SectionDefinedAlphabetParameterSet
      • de.jstacs.parameters.ArrayParameterSet
        • de.jstacs.data.AlphabetContainerParameterSet.AlphabetArrayParameterSet
    • de.jstacs.parameters.InstanceParameterSet<T>
      • de.jstacs.data.AlphabetContainer.AbstractAlphabetContainerParameterSet<T>
        • de.jstacs.data.AlphabetContainerParameterSet
  • de.jstacs.data.SequenceEnumeration (implements de.jstacs.data.RecyclableSequenceEnumerator)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • de.jstacs.data.EmptyDataSetException
      • de.jstacs.data.WrongAlphabetException
      • de.jstacs.data.WrongLengthException

Interface Hierarchy

• java.util.Enumeration<E>
  • de.jstacs.data.RecyclableSequenceEnumerator

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • de.jstacs.data.DinucleotideProperty
    • de.jstacs.data.DinucleotideProperty.Type
    • de.jstacs.data.DinucleotideProperty.HowCreated
    • de.jstacs.data.DataSet.PartitionMethod
    • de.jstacs.data.DataSet.WeightedDataSetFactory.SortOperation
    • de.jstacs.data.AlphabetContainer.AlphabetContainerType