Package de.jstacs.algorithms.alignment

Provides classes for alignments.

See:
          Description

Class Summary
Alignment Class for computing optimal alignments using Needleman-Wunsch algorithm of for affine gap costs Gotohs algorithm.
PairwiseStringAlignment Class for the representation of an alignment of two Strings.
StringAlignment Class for the representation of an alignment of Strings.
 

Enum Summary
Alignment.AlignmentType  
 

Package de.jstacs.algorithms.alignment Description

Provides classes for alignments.