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Class Summary |
| CDFOfNormal |
This class enables to compute the
The code is a simplified version of pnorm.c from R (version 2.8.0 downloaded at 07.12.2008 about 19:30). |
| DurationDiffSM |
This class is the super class for all one dimensional position scoring functions that can be used as durations for semi Markov models. |
| ExtendedZOOPSDiffSM |
This class handles mixtures with at least one hidden motif. |
| MixtureDurationDiffSM |
This class implements a mixture of DurationDiffSMs. |
| PositionDiffSM |
This class implements a position scoring function that enables the user to get a score without using a Sequence
object. |
| SkewNormalLikeDurationDiffSM |
This class implements a skew normal like discrete truncated distribution. |
| UniformDurationDiffSM |
This scoring function implements a uniform distribution for positions. |