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| Packages that use HMMFactory.HMMType | |
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| de.jstacs.sequenceScores.statisticalModels.trainable.hmm | The package provides all interfaces and classes for a hidden Markov model (HMM). |
| Uses of HMMFactory.HMMType in de.jstacs.sequenceScores.statisticalModels.trainable.hmm |
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| Methods in de.jstacs.sequenceScores.statisticalModels.trainable.hmm that return HMMFactory.HMMType | |
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static HMMFactory.HMMType |
HMMFactory.HMMType.valueOf(String name)
Returns the enum constant of this type with the specified name. |
static HMMFactory.HMMType[] |
HMMFactory.HMMType.values()
Returns an array containing the constants of this enum type, in the order they are declared. |
| Methods in de.jstacs.sequenceScores.statisticalModels.trainable.hmm with parameters of type HMMFactory.HMMType | |
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static AbstractHMM |
HMMFactory.createProfileHMM(MaxHMMTrainingParameterSet trainingParameterSet,
HMMFactory.HMMType type,
boolean likelihood,
int order,
int numLayers,
AlphabetContainer con,
double ess,
boolean conditionalMain,
boolean closeCircle,
double[][] conditionInitProbs)
Creates a new profile HMM for a given architecture and number of layers. |
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