Package | Description |
---|---|
de.jstacs.sequenceScores.statisticalModels.differentiable |
Provides all
DifferentiableStatisticalModel s, which can compute the gradient with
respect to their parameters for a given input Sequence . |
de.jstacs.sequenceScores.statisticalModels.differentiable.mixture.motif |
Modifier and Type | Method and Description |
---|---|
static ExtendedZOOPSDiffSM |
DifferentiableStatisticalModelFactory.createZOOPS(int length,
DifferentiableStatisticalModel motif,
HomogeneousDiffSM bg)
This method allows to create a "zero or one occurrence per sequence" (ZOOPS) model that allows to discover binding sites in a
DataSet . |
Modifier and Type | Method and Description |
---|---|
ExtendedZOOPSDiffSM |
ExtendedZOOPSDiffSM.clone() |