Uses of Class
de.jstacs.data.sequences.SparseSequence

Packages that use SparseSequence

Package	Description
de.jstacs.data.sequences	Provides classes for representing sequences. The implementations of sequences currently include DiscreteSequences prepared for alphabets of different sizes, and ArbitrarySequences that may contain continuous values as well. As sub-package provides the facilities to annotate Sequences.

Uses of SparseSequence in de.jstacs.data.sequences

Methods in de.jstacs.data.sequences that return SparseSequence

Modifier and Type	Method and Description
SparseSequence	SparseSequence.complement(int start, int end)
protected SparseSequence	SparseSequence.flatCloneWithoutAnnotation()
SparseSequence	SparseSequence.reverse(int start, int end)
SparseSequence	SparseSequence.reverseComplement(int start, int end)