Package de.jstacs.scoringFunctions.mix.motifSearch

Class Summary

CDFOfNormal	This class enables to compute the The code is a simplified version of pnorm.c from R (version 2.8.0 downloaded at 07.12.2008 about 19:30).
DurationScoringFunction	This class is the super class for all one dimensional position scoring functions that can be used as durations for semi Markov models.
HiddenMotifsMixture	This class handles mixtures with at least one hidden motif.
MixtureDuration	This class implements a mixture of DurationScoringFunctions.
PositionScoringFunction	This class implements a position scoring function that enables the user to get a score without using a Sequence object.
SkewNormalLikeScoringFunction	This class implements a skew normal like discrete truncated distribution.
UniformDurationScoringFunction	This scoring function implements a uniform distribution for positions.