de.jstacs.motifDiscovery
Class SignificantMotifOccurrencesFinder.SumOfProbabilities

java.lang.Object
  de.jstacs.motifDiscovery.SignificantMotifOccurrencesFinder.SumOfProbabilities

All Implemented Interfaces:

SignificantMotifOccurrencesFinder.JoinMethod

Enclosing class:

SignificantMotifOccurrencesFinder

public static class SignificantMotifOccurrencesFinder.SumOfProbabilities
extends Object
implements SignificantMotifOccurrencesFinder.JoinMethod

Joins several profiles containing log-probabilities into one profile containing the logarithm of the sum of the probabilities of the single profiles.

Author:

Jan Grau

Constructor Summary

SignificantMotifOccurrencesFinder.SumOfProbabilities()

Method Summary

double[]

joinProfiles(double[][] profiles) Joins the profiles in profiles into a common profile, where each line of profiles corresponds to one profile to be joined

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SignificantMotifOccurrencesFinder.SumOfProbabilities

public SignificantMotifOccurrencesFinder.SumOfProbabilities()

Method Detail

joinProfiles

public double[] joinProfiles(double[][] profiles)

Description copied from interface: SignificantMotifOccurrencesFinder.JoinMethod

Joins the profiles in profiles into a common profile, where each line of profiles corresponds to one profile to be joined

Specified by:

joinProfiles in interface SignificantMotifOccurrencesFinder.JoinMethod

Parameters:

profiles - the profiles to be joined

Returns:

the joined profiles