de.jstacs.motifDiscovery
Interface SignificantMotifOccurrencesFinder.JoinMethod

All Known Implementing Classes:

SignificantMotifOccurrencesFinder.SumOfProbabilities

Enclosing class:

SignificantMotifOccurrencesFinder

public static interface SignificantMotifOccurrencesFinder.JoinMethod

Interface for methods that combine several profiles over the same sequence into one common profile

Author:

Jan Grau

Method Summary

double[]

joinProfiles(double[][] profiles) Joins the profiles in profiles into a common profile, where each line of profiles corresponds to one profile to be joined

Method Detail

joinProfiles

double[] joinProfiles(double[][] profiles)
                      throws Exception

Joins the profiles in profiles into a common profile, where each line of profiles corresponds to one profile to be joined

Parameters:

profiles - the profiles to be joined

Returns:

the joined profiles

Throws:

Exception - if the profiles could not be joined, e.g. because they are not of equal length