Uses of Class
de.jstacs.motifDiscovery.SignificantMotifOccurrencesFinder.RandomSeqType

Packages that use SignificantMotifOccurrencesFinder.RandomSeqType

de.jstacs.motifDiscovery

This package provides the framework including the interface for any de novo motif discoverer.

Uses of SignificantMotifOccurrencesFinder.RandomSeqType in de.jstacs.motifDiscovery

Methods in de.jstacs.motifDiscovery that return SignificantMotifOccurrencesFinder.RandomSeqType

static SignificantMotifOccurrencesFinder.RandomSeqType	SignificantMotifOccurrencesFinder.RandomSeqType.valueOf(String name) Returns the enum constant of this type with the specified name.
static SignificantMotifOccurrencesFinder.RandomSeqType[]	SignificantMotifOccurrencesFinder.RandomSeqType.values() Returns an array containing the constants of this enum type, in the order they are declared.

Constructors in de.jstacs.motifDiscovery with parameters of type SignificantMotifOccurrencesFinder.RandomSeqType

SignificantMotifOccurrencesFinder(MotifDiscoverer disc, SignificantMotifOccurrencesFinder.RandomSeqType type, boolean oneHistogram, int numSequences, double sign)
This constructor creates an instance of SignificantMotifOccurrencesFinder that uses the given SignificantMotifOccurrencesFinder.RandomSeqType to determine the siginificance level.

SignificantMotifOccurrencesFinder(MotifDiscoverer disc, SignificantMotifOccurrencesFinder.RandomSeqType type, SignificantMotifOccurrencesFinder.JoinMethod joiner, boolean oneHistogram, int numSequences, double sign)
This constructor creates an instance of SignificantMotifOccurrencesFinder that uses the given SignificantMotifOccurrencesFinder.RandomSeqType to determine the siginificance level.