Uses of Class
de.jstacs.sequenceScores.statisticalModels.differentiable.mixture.motif.ExtendedZOOPSDiffSM

Packages that use ExtendedZOOPSDiffSM

de.jstacs.sequenceScores.statisticalModels.differentiable	Provides all DifferentiableStatisticalModels, which can compute the gradient with respect to their parameters for a given input Sequence.
de.jstacs.sequenceScores.statisticalModels.differentiable.mixture.motif

Uses of ExtendedZOOPSDiffSM in de.jstacs.sequenceScores.statisticalModels.differentiable

Methods in de.jstacs.sequenceScores.statisticalModels.differentiable that return ExtendedZOOPSDiffSM

static ExtendedZOOPSDiffSM

DifferentiableStatisticalModelFactory.createZOOPS(int length, DifferentiableStatisticalModel motif, HomogeneousDiffSM bg) This method allows to create a "zero or one occurrence per sequence" (ZOOPS) model that allows to discover binding sites in a DataSet.

Uses of ExtendedZOOPSDiffSM in de.jstacs.sequenceScores.statisticalModels.differentiable.mixture.motif

Methods in de.jstacs.sequenceScores.statisticalModels.differentiable.mixture.motif that return ExtendedZOOPSDiffSM

ExtendedZOOPSDiffSM

ExtendedZOOPSDiffSM.clone()