Uses of Interface
de.jstacs.scoringFunctions.VariableLengthScoringFunction

Packages that use VariableLengthScoringFunction

de.jstacs.scoringFunctions	Provides ScoringFunctions that can be used in a ScoreClassifier.
de.jstacs.scoringFunctions.homogeneous	Provides ScoringFunctions that are homogeneous, i.e. model probabilities or scores independent of the position within a sequence
de.jstacs.scoringFunctions.mix	Provides ScoringFunctions that are mixtures of other ScoringFunctions.

Uses of VariableLengthScoringFunction in de.jstacs.scoringFunctions

Classes in de.jstacs.scoringFunctions that implement VariableLengthScoringFunction

class	AbstractVariableLengthScoringFunction This abstract class implements some methods declared in NormalizableScoringFunction based on the declaration of methods in VariableLengthScoringFunction.
class	CMMScoringFunction This scoring function implements a cyclic Markov model of arbitrary order and periodicity for any sequence length.

Uses of VariableLengthScoringFunction in de.jstacs.scoringFunctions.homogeneous

Classes in de.jstacs.scoringFunctions.homogeneous that implement VariableLengthScoringFunction

class	HMM0ScoringFunction This scoring function implements a homogeneous Markov model of order zero (hMM(0)) for a fixed sequence length.
class	HMMScoringFunction This scoring function implements a homogeneous Markov model of arbitrary order for any sequence length.
class	HomogeneousScoringFunction This is the main class for all homogeneous ScoringFunctions.
class	UniformHomogeneousScoringFunction This scoring function does nothing.

Uses of VariableLengthScoringFunction in de.jstacs.scoringFunctions.mix

Classes in de.jstacs.scoringFunctions.mix that implement VariableLengthScoringFunction

class

VariableLengthMixtureScoringFunction This class implements a mixture of VariableLengthScoringFunction by extending MixtureScoringFunction and implementing the methods of VariableLengthScoringFunction.

Constructors in de.jstacs.scoringFunctions.mix with parameters of type VariableLengthScoringFunction

VariableLengthMixtureScoringFunction(int starts, boolean plugIn, VariableLengthScoringFunction... component)
This constructor creates a new VariableLengthMixtureScoringFunction.