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Storable
cannot be trained anyway.
ParameterSetContainer
ParameterSet
depends on the
value of this Parameter
, this variable holds a reference to that
ParameterSet
.
ParameterSet
is
saved, which assists reconstruction from XML.
-f
for a given
DifferentiableFunction
f
.DifferentiableFunction
f
for which
-f
should be calculated.
Function
f
.Function
f
for which -f
should be calculated.
OneDimensionalFunction
.OneDimensionalFunction
f
for which
-f
should be calculated.
PhyloTree
true
if the next element still exists and can be
fetched using RangeParameter.getValue()
, false
otherwise.
NonParsableException
is thrown if some object could not be restored
(parsed) from a StringBuffer
.NonParsableException
with standard error message
("StringBuffer not parsable.
NonParsableException
with given error
message
.
Storable
.
double
contains the normalization constant of the
instance.
double
array or
a part of a double
array.d
using the value
v
for normalisation.
d
writing the result in
dest
starting at position start
while
d
remains unchanged.
d
between start index
start
and end index end
using the value
v
for the normalisation.
ScoringFunction
s.Storable
.
NormalizableScoringFunction
to a normalized NormalizableScoringFunction
.Storable
.
ScoreClassifier.getLastScore()
if the classifier is not trained.
NotTrainedException
is thrown if the user tries to use an untrained
model.NotTrainedException
with standard error message
("The model is not trained yet.
NotTrainedException
with given error
message
.
NormalizableScoringFunction
.
ProgressUpdater
doing nothing but forces a
crossvalidation that is used with an instance of this class to continue to
its end.SequenceAnnotationParser
returns always null
as SequenceAnnotation
.Number
that implement
Comparable
(e.g.NumberValidator
for a given upper and lower bound.
Storable
.
f: R^n -> R
.NumericalDifferentiableFunction
.
ParameterSet
for numerical training of an AbstractHMM
.Storable
.
Result
values.Storable
.
double
.
int
.
Integer
.
long
.
NumericalResult
.NumericalResultSet
containing one
NumericalResult
.
NumericalResultSet
from some arrays of
NumericalResult
s.
NumericalResultSet
from a LinkedList
of
NumericalResult
s.
Storable
.
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